Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0109 ATGCCTTATGTGAGAAATGAAGTGCTTAATTCATCTTCATCTTTCATGACTGATTGGCTGTGGCACGAGAAGGAGAGTGCAGTATTGAAAACCAAAAGGAAAATGTCAGGGCGAGCCAATGGACATCATGACACCTTGCAGCTTGTGCTGAGAAAATCACTGGCGTATGGTGGTCTTGCTCGAGGTCTTCATGAAAGTGCAAAAGTGATTGACAAGCATATGTGCAAGATCGATTCCGAAGGAAAGGCTAGGAAGGTAACTGGTTACTCCTGTGTGGTTGTCAAGGTTTACTGTGAATTTATGGGGTTGAATACTGGTTTGGCAGCCAAAATATGGAAAGTGGAAATATCAGTTAGCACAGTGAAGAACAGTATAGAACACTGCACATTGTATCCGTCAGCGAACAGTGCAAGAATTCAAACGCAAAAGGGCAAAATAGTAATAGTGACACACTTCTGGCCTCAATGCTCAAGAACAGAGGCATTAAAGTGCCAGGGAGGAACAGAGAGAGCTTCCGTAAAGAGGCTTTTTAAGGTTCCTGAGCTTATAATGGCTCCTCCTGGCAGAGAAGTGCTAGAGAAGCTGGTGGATTTTGGGGACAGCCTCTTCCAATACCTCTCTTCGGTTAATCAGCTTCTCAATCTTCTTGATAAACTTGAGAATTTATTATCAACCTTGGATCAAGCACCAGATGGGACAGTGAAAGATGCACTTCTACCATTGATGAAGGCATTGATTTCCAATGAACTTTTCAGGCACTCGGATGAGGATGTTAAGATTTCAGTTACATCTTGCATTGCTGAGATTATTAGAATAACAGCACCAGAAGCCCCTTACGATGATGAGCAGATGAAGGAAATTTTCAAGCTCACAGTAGCAGCTTTTGAGAAATTGTCTCACGTGTCTGGCCGCTGTTATGAAAAGGCACTTTTGATACTTGATAATGTTGCAAGTGTCAGGTCATTCTTGGTCATGATGGATCTTGAGTGTGATGACTTGATTATTGAGATGTTTCAGCAGTTCCTAGGAGTTATAAGGTCAAATCATCCGCATACTGTGATATTTGCCATGGAAACAATAATGACCATGGTCTTGAATGAGAGTGAAGAAATTTCCTCAGATCTTCTTAGACCTCTATTAGATAGCGTAAGAAAGGAAAATCAGACAATTTCACGTACTTCTTGGACATTGGGGGAGAAAGTTATTACAAACTGTGCTGATAAGCTTCAGCACTATCTTATGAGAGCAGTGAAGTCCACTGGCAGAGCTCTGGATGATTACGCCCAAATAGTAGTTTCTGTTTGCCAGAGAGGATCTGAATCTCTCCAACACGATCTTTCAAATGGCTCTAGAAATCCACTGGTTCAGGCTGATGAAAACAAGCTGGCTGTGACTAAGGGGCTTGAAACAGATATGACTTGTGCAAAAGATGTTGCTCAAATTATGGATGAGGCAAAGTCAAACAAAAGAAATGCCAGTGCTTCTACCATGGATGCTGAAATTATCAAAAAGAAAGGTTCAAAAAGACAACCACATTCTGGTCTTACTAAGAATGACAAAAGAAACAGGGAAAAACCCAATTTTAAAAGTGGAAATTTAGAATCTGTTTGGGAACCAAAAGCAAAAGCTGAGCTGGATACCATGCCAAAGAAAAGGGGTCGTAAACCTAATTCTTTAATGAATCCAGAGGAAGGCTATGATCACTCTTGGATTTACATGGGAAGGAAATCTGCAAAATCAGTTCAGTCCAGAAAGGCTCATGATAATGGCTGTGATTTTCCACCTTCTGAAAGCCCTGCTTCCAGAAAGTATAAGCTGCTGTCAAAGCCTGAAAATGTGGGTGAACTTTCTCAACCTAAGACTGAGAAAACTACAGAAACAGCTAAATTGATAAAGGCTTGTGATAGTGGCATTGAGCTTTCACCTTCTGATAACCCTCCTTCACGAAAGGATAAGTTGCTTTTGAAGCCTGAAAATATGAGTGAAGGCTGTGAACCTCTTGTGTCTTTACCTAAAACTGACGAGAATACTGATGCTGCTCGTCCTTTGACAAATCATAGCATTCCTAATACAAGCCATCCCAAAAGGGGCCGGCCAAAGAAAAATATTATCACTAATAATCATGAAATTGACCCTAATTCTGCATCGATGCTAAAGGAAGATCGTTTGAAACCTCCTAGTCTGAAGTTGGAAAAGGATTTTGAAGTAATGAAAAATGCTGCAAAGACAGATAGGAAAACTGCCATGGCTCCTAATTTGATAGTTGGTGAGATGAATTCTATGTCAACCTGTGAAGATGAGGAGAAACCCAAGTCAGTTATGAATATTGAGGCAGCAAATATAGAAGAGGGCAAGTCCTTAACTCAAACAGATGTTAAGAAAAAGCGGAGGCTTGATGCTACTTCTAATATAGATCTCAATAAATCATCCATTATTAAGCTGATAACTGAGTCTACAACTAAAACACTGAATGGAGTTGAAGAAACCCTTCAAACAAGACAAAGGAAGCGGGGCACTGCTGTAAGTGTAGAGGCTTCTGAAGCACGTGACTGGAATGGCCCTTTAGTTGGTAGCAGGATCAAGGTCTGGTGGCCAATGGACAAGAAATCTTATTTGGCTTACAAGATAATTGCATGGGCTGCTGAGAGTGGAGTAGAGGCTGTTCTCTCCTCCACCGTCTCTTTTGTCTACGTTGGCCTGTTGTATAGTGTTAATACATATGAATCAGTAAGCATGCTTTGTGATTTAGATAAAGAATTCAGATTGGGTTGGTTTTATGAAGGTGTTGTTGATTCTTATGACTCTGTTAAAGGAAAGCACAAGATTTTGTATGCTGATGGTGATGTGGAAGTATTAAACCTCAAAAAGCAACGCTGGGAGCTAATTACTGACCATGTTTCACCAGATGGAGAACAAGGAATTGATCTTCAACAGCTTGAGGTGGCATCAGATACAGCAGAAAAAAGAAAAGGAAATTCAGAGTCAGAGTCAGCCAAGGGCACACATGTCAATTCTCTCCTGAGGAGTAGGGATAGAGCTTCTGCCAGAATTTCCAAATCTATACCTGCAAAATCCGCTGGCAAATCTCTGGATAATTCTGCACTGATGGCTGCTGAATCCATGGCTGATCCACCTAGAACTGATGATGGGCAAGTCTAA 3159 0.4106 MPYVRNEVLNSSSSFMTDWLWHEKESAVLKTKRKMSGRANGHHDTLQLVLRKSLAYGGLARGLHESAKVIDKHMCKIDSEGKARKVTGYSCVVVKVYCEFMGLNTGLAAKIWKVEISVSTVKNSIEHCTLYPSANSARIQTQKGKIVIVTHFWPQCSRTEALKCQGGTERASVKRLFKVPELIMAPPGREVLEKLVDFGDSLFQYLSSVNQLLNLLDKLENLLSTLDQAPDGTVKDALLPLMKALISNELFRHSDEDVKISVTSCIAEIIRITAPEAPYDDEQMKEIFKLTVAAFEKLSHVSGRCYEKALLILDNVASVRSFLVMMDLECDDLIIEMFQQFLGVIRSNHPHTVIFAMETIMTMVLNESEEISSDLLRPLLDSVRKENQTISRTSWTLGEKVITNCADKLQHYLMRAVKSTGRALDDYAQIVVSVCQRGSESLQHDLSNGSRNPLVQADENKLAVTKGLETDMTCAKDVAQIMDEAKSNKRNASASTMDAEIIKKKGSKRQPHSGLTKNDKRNREKPNFKSGNLESVWEPKAKAELDTMPKKRGRKPNSLMNPEEGYDHSWIYMGRKSAKSVQSRKAHDNGCDFPPSESPASRKYKLLSKPENVGELSQPKTEKTTETAKLIKACDSGIELSPSDNPPSRKDKLLLKPENMSEGCEPLVSLPKTDENTDAARPLTNHSIPNTSHPKRGRPKKNIITNNHEIDPNSASMLKEDRLKPPSLKLEKDFEVMKNAAKTDRKTAMAPNLIVGEMNSMSTCEDEEKPKSVMNIEAANIEEGKSLTQTDVKKKRRLDATSNIDLNKSSIIKLITESTTKTLNGVEETLQTRQRKRGTAVSVEASEARDWNGPLVGSRIKVWWPMDKKSYLAYKIIAWAAESGVEAVLSSTVSFVYVGLLYSVNTYESVSMLCDLDKEFRLGWFYEGVVDSYDSVKGKHKILYADGDVEVLNLKKQRWELITDHVSPDGEQGIDLQQLEVASDTAEKRKGNSESESAKGTHVNSLLRSRDRASARISKSIPAKSAGKSLDNSALMAAESMADPPRTDDGQV 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0109 1052 MobiDBLite consensus disorder prediction 501 528 - -
Glsi07g0109 1052 Gene3D - 188 469 IPR011989 -
Glsi07g0109 1052 Pfam Sister chromatid cohesion protein PDS5 protein 211 413 - -
Glsi07g0109 1052 CDD Tudor_Agenet_AtEML-like 856 961 - -
Glsi07g0109 1052 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 192 439 IPR039776 GO:0007064
Glsi07g0109 1052 MobiDBLite consensus disorder prediction 678 692 - -
Glsi07g0109 1052 MobiDBLite consensus disorder prediction 539 558 - -
Glsi07g0109 1052 MobiDBLite consensus disorder prediction 983 1052 - -
Glsi07g0109 1052 MobiDBLite consensus disorder prediction 485 564 - -
Glsi07g0109 1052 Coils Coil 976 996 - -
Glsi07g0109 1052 SUPERFAMILY ARM repeat 210 431 IPR016024 -
Glsi07g0109 1052 MobiDBLite consensus disorder prediction 662 711 - -
Glsi07g0109 1052 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0109 Glsi-ChrGlsi07 660261 673970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0109 46 99 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 36.364 5.11e-10 57.4