Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0107 ATGGACAATGAGGAAATTCCATCTTTTCCTTCAACACCTGCAACACCAGGGACTCCTGGTGGCCCTCTGTTTGGTGGGTTCAGGTCGGAGGGAACGGGGAACGGCTACGTTAAGAAATCACTCCTCAAGAATTGCAAGTGTTTCAGTGTTGAAGAGTGGACTTTAGAAGAAGGAGCTTTACCTAGAATCTCTTGCTCATTGCCACCCCCTCCTGTCCCTCTGGCAAGAAAGGTAGGAGCTGAATTTATAGGCACTTTCATCCTCATGTTTGCGGGGATGGCCACTGCTATTGTGAACCAAAAGATACAAGGCTCCGAGACTCTAATTGGATGTGCCGCCTCTACTGGCCTTGCAGTTATGATCGTCATCCTCTCCACGGGCCACATCTCCGGTGCACATCTCAACCCTGCAGTCACTATTTCCTTTGCTGCATTAAAGCATTTCCCATGGAAAAATGTGCCTATGTACATTGGTGCCCAAGTTATCGCGTCTCTGTGTGCTGCATTTGCTCTGAAGGGGATATTTCATCCCTTCATGAGTGGCGGAGTCACGGTACCTTCAGTAGGATATGGGCAAGCGTTTGCTTTAGAGTTCATCATTAGCTTTAACCTCATGTTCGTTGTCACTGCAGTGGCCACCGACACTAGAGCTGTGGGAGAGCTTGCGGGCATCGCGGTGGGAGCGACGGTGATGCTCAACATCCTCATAGCCGGGCCGGCAACAGGAGCCTCAATGAACCCAGTAAGGACCCTAGGTTCAGCTATTGCAGCAAACAACTACAGAGCCATATGGGTGTATCTCACAGCTCCCATACTAGGAGCTCTAGGTGGGGCAGGTATCTACACTGCAGTCAAGCTGCCTGAAGAAGAAGATGGTAACGCCCAGGGAAAGGCCTCAACTCCCAGGAGCTTCAGAAGGTGA 921 0.5071 MDNEEIPSFPSTPATPGTPGGPLFGGFRSEGTGNGYVKKSLLKNCKCFSVEEWTLEEGALPRISCSLPPPPVPLARKVGAEFIGTFILMFAGMATAIVNQKIQGSETLIGCAASTGLAVMIVILSTGHISGAHLNPAVTISFAALKHFPWKNVPMYIGAQVIASLCAAFALKGIFHPFMSGGVTVPSVGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGASMNPVRTLGSAIAANNYRAIWVYLTAPILGALGGAGIYTAVKLPEEEDGNAQGKASTPRSFRR 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0107 306 Pfam Major intrinsic protein 74 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi07g0107 306 PANTHER AQUAPORIN NIP2-1 42 290 IPR034294 -
Glsi07g0107 306 SUPERFAMILY Aquaporin-like 73 290 IPR023271 -
Glsi07g0107 306 Gene3D Glycerol uptake facilitator protein. 71 298 IPR023271 -
Glsi07g0107 306 MobiDBLite consensus disorder prediction 1 25 - -
Glsi07g0107 306 FunFam Aquaporin NIP2-1 64 296 - -
Glsi07g0107 306 PRINTS Major intrinsic protein family signature 76 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi07g0107 306 PRINTS Major intrinsic protein family signature 115 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi07g0107 306 PRINTS Major intrinsic protein family signature 152 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi07g0107 306 PRINTS Major intrinsic protein family signature 196 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi07g0107 306 PRINTS Major intrinsic protein family signature 264 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi07g0107 306 PRINTS Major intrinsic protein family signature 227 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi07g0107 306 ProSitePatterns MIP family signature. 133 141 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0107 Glsi-ChrGlsi07 643163 645991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0107 1 306 Major Intrinsic Protein MIP AT1G80760 78.710 1.11e-169 471