Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0098 ATGCCTTCGAGACCCTTCCCTCCAAGTCCCAGTTTTTTCACCAAAACCAGGGTCCTCTTCCTGGCACTCACCATCTCAGCGTCTCTTGTCATTTTCTGCTCCCTACTTTACTTCCTTTACTATCTCTGGCACTCACTTGTACACAGAGCTCAAACTATCCCCTTTGATGCAAGTGCTCCCTTAAAGCTTCAAAGATTCTCATACAAAGATCTGAAGCAAGCAACAAATGGCTTTGACATTGCCAATGTCATTGGTAAAGGCGGGTCTGGCACCGTTTTCAGAGGAGCACTTAAAGATGGTAAATTGATTGCTATTAAGCATCTAGATGCGTTGTCTTTGCAGACGGAGCGAGAGTTTCAGAATGAGCTGCAGGTTCTTGGGGGGTTAAGATCTCCCTTTCTGGTTACCCTTTTGGGATATTGTGTGGAAAAGAACAAAAGAGTTTTGGTGTATGAGTATATGCCCAACAGAAGCTTGCAGGAGTCCCTCTTTGGAGATGCGTGTTTGAGTTTGAGCTGGGAGAGAAGGTTTCTTGTAATACTGGATGTTGCTAGAGCATTGGAATTCTTGCACCTGGGATGTGATCCACCAGTGATCCATGGGGATGTTAAGCCAAGCAATGTTCTGCTTGATGAAGAGTACCGTGGAAAGATTTCAGACTTCGGATTGTCAAGATTTAAAGTGGAGGGTGAGTTTGGTGGGGATTTGTTTAGCCAGGACTTAGGTAAGAGTCAGGAGCTATGGAAGAGCCAAGAGTTTTCAGGTAATTTAACTGCAGAAAGTCCCGCCATTGGTCCTCCAGTTGAGGGTGTTAATGAACTAGATTTTGCTCTAGCTTTGCAGGCATCTTCTTCATCCAAAAATAGCCGAACATGTTTTAATATTAGAGCTTTGAACTTGAATTCTTTGAATTATAATGACAGTGAGAATGAAATAAGAAGTGGTAATGCGAAGGGGAAGGAAATTTCAACTTTGGATGTTGGTGGCGATGATTGGAAGAATAAGTTTGATCCTTGCGATGATGAGTTTTCCAGCATTGATCGTAGTAAAGAGTTAAATGCTAATGCTTCCCCCGGAGATGAAGAGAAGGCAAACGAAAAGCTATGGGGAAAGGATTGGTGGTGGAGGCAGGATGAAGGTGGAGAACTATGTAGTAAAGATTATGTCATGGAGTGGATAGGAAGTCAAATTTGTCCATCAAACCCTGATTGGGATGAAGGAAAGAAGAATATTCATGAGAAAACAGAACCGGAAAATTCAAGTCCAATAATAGATAAACCAGACGATGCAAATGAAACCCAATTTCAAGCAACGGGGATAAAAATTACCGATAATGGGGTTGAGAACAAAGAATCAAGTGGAAAGAAAAATCGTAAGAAGAAGCACAGGAAGATGCAAGAGTGGTGGAAAGAAGAGCACCTTGCTGAATTAAGCAAGAAGAGCTGTAAGCTGCAAAGTCTTCAAACTAAGTGGAAGAAAGGGCTCAATGTACCACATTTTGATTTGGGTAGAAGGTTTTTTATTTGCAGATGTAAGAACTTTGCAGGGGAGAGTCAGAATGAGTGTGATCTAAATGGGGAGTTTAGTTTCAGAAGAGGTTGGAGGAAGAAAAGTACTCATTCCAATAGCAGTGACATGTGTAGTGATCTTTTCAGCCGTGAGCTCAGCAGCACAACTAGCATGAGAGGGACACTCTGCTATGTTGCTCCTGAATATGGTGGGTGTGGGTTCTTAATGGAGAAGGCTGACATTTACAGTTTAGGAGTTATGATCCTCGTGATTGTTTCAGGCAGACGACCATTACACGTTCTTGCATCCCCCATGAAGCTGGAGAAAGCTAACCTAATAAGCTGGTGTAGGCACTTGGCTCAAGCCGGTAACATCTTAGAACTAGTAGATGAGAGATTGAAAGATTACAACACGGAGCAAGCAACCTTGTGTATCAACTTGGCACTCGCTTGCTTACAGAAAATTCCAGAACTGCGGCCAGATATTGGGGATATCGTTAAGATTTTGAAAGGGGATATGGATCTCCCCCCACTTCCATTTGAGTTCTCCCCCTCTCCTCCTTCCAAATTATACAGCAGATCAAGGACAAAAGAGAAGGGCAATGCAGAATAG 2121 0.4286 MPSRPFPPSPSFFTKTRVLFLALTISASLVIFCSLLYFLYYLWHSLVHRAQTIPFDASAPLKLQRFSYKDLKQATNGFDIANVIGKGGSGTVFRGALKDGKLIAIKHLDALSLQTEREFQNELQVLGGLRSPFLVTLLGYCVEKNKRVLVYEYMPNRSLQESLFGDACLSLSWERRFLVILDVARALEFLHLGCDPPVIHGDVKPSNVLLDEEYRGKISDFGLSRFKVEGEFGGDLFSQDLGKSQELWKSQEFSGNLTAESPAIGPPVEGVNELDFALALQASSSSKNSRTCFNIRALNLNSLNYNDSENEIRSGNAKGKEISTLDVGGDDWKNKFDPCDDEFSSIDRSKELNANASPGDEEKANEKLWGKDWWWRQDEGGELCSKDYVMEWIGSQICPSNPDWDEGKKNIHEKTEPENSSPIIDKPDDANETQFQATGIKITDNGVENKESSGKKNRKKKHRKMQEWWKEEHLAELSKKSCKLQSLQTKWKKGLNVPHFDLGRRFFICRCKNFAGESQNECDLNGEFSFRRGWRKKSTHSNSSDMCSDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSLGVMILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQAGNILELVDERLKDYNTEQATLCINLALACLQKIPELRPDIGDIVKILKGDMDLPPLPFEFSPSPPSKLYSRSRTKEKGNAE 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0098 706 MobiDBLite consensus disorder prediction 431 447 - -
Glsi07g0098 706 FunFam Receptor-like serine/threonine-protein kinase At4g25390 531 678 - -
Glsi07g0098 706 MobiDBLite consensus disorder prediction 400 463 - -
Glsi07g0098 706 SUPERFAMILY Protein kinase-like (PK-like) 58 692 IPR011009 -
Glsi07g0098 706 PANTHER OS07G0586332 PROTEIN 12 701 IPR044576 -
Glsi07g0098 706 FunFam putative receptor-like protein kinase At1g80870 154 264 - -
Glsi07g0098 706 Coils Coil 470 490 - -
Glsi07g0098 706 SMART serkin_6 78 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0098 706 FunFam Receptor-like serine/threonine-protein kinase At4g25390 47 153 - -
Glsi07g0098 706 MobiDBLite consensus disorder prediction 682 706 - -
Glsi07g0098 706 MobiDBLite consensus disorder prediction 405 425 - -
Glsi07g0098 706 Pfam Protein kinase domain 80 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0098 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Glsi07g0098 706 ProSiteProfiles Protein kinase domain profile. 78 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0098 706 Gene3D Transferase(Phosphotransferase) domain 1 533 677 - -
Glsi07g0098 706 Gene3D Transferase(Phosphotransferase) domain 1 154 254 - -
Glsi07g0098 706 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Glsi07g0098 706 Gene3D Phosphorylase Kinase; domain 1 46 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0098 Glsi-ChrGlsi07 593812 595932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0098 558 672 Receptor kinase-like Gene Family AT3G58690 32.479 6.06e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Glsi07g0098 Pkinase 6.8e-27 CL0016