Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0092 ATGGGGATATACCTCAGCACCCCGAAAACAGAAAAGGCCTCTGAGGATGGAGAGAACGATAGGGTTCGCTACGGCTTGTCTTCCATGCAGGGGTGGCGTGCTACCATGGAAGATGCTCATGCAGCCCATCCAGATTTGGACGAGTCTACATCTTTATTTGGTGTTTATGATGGTCATGGAGGTAAAGCCGTTGCTAAATTTTGTGCTAAATACCTACATCGACAGGTGCTTAAGCATGAAGCCTATGTAGCTGGAGATTTAGGCACATCTTTACAGAAAACTTTTCTCAGAATGGATGAGATGATGCGTGGACAACGAGGGTGGAGAGAATTAGCAGTCTTGGGAGATAATATAGAAAAATTGTCTGGTATGCTAGAGGGATTTATATGGTCTCCCAAGAGTGGTGACGTCAATGACCATTTTGATGATTGGGCTCTTGAGGAGGGGCCCCATTCTGACTTTAGTGGACCAAACTGTGGGTGCACAGCTTGTGTGGCAGTCATTCAAGGAAACCAACTTGTTGTTGCAAATGCTGGTGATTCTCGGTGTGTGTTATCAAGGAAGGGCCAGGCACATAATTTGTCTAAAGATCACAAGCCTGACCTTGAGGTTGAGAGAGACAGGATTCTAAAAGCTGGTGGTTTCATTCAAGTTGGGCGGGTTAATGGAAGTTTAAATTTGGCTAGAGCAATTGGAGACATGGAATTCAAGCAAAACAAGTTTTTGCCAGCTGAAAAGCAGATTGTGACAGCTGATCCAGACATAAATTCTGTTGAGCTTTGCGATGATGACGAGTTTCTTGTAATAGCTTGTGATGGGATATGGGATTGCATGTCAAGCCAACAGCTTGTGGATTTTATACATGGGCAGTTAAAGACGGAGAAAAAACTTTCTGTGGTTTGTGAGAGAGTATTTGATAGGTGCTTGGCCCCAACAGCTGGTGGTGAGGGATGTGACAACATGACCATGATCTTGATTCAGTTCAAAAAGCCTTCAAGTCCAGGTGCTTCTGTTGTGGACAAGCCTCTGTCATCTGCTCAACCATCCGAGGCTGACAAAAGTTCAGCAAAAATAGAATCGAAGTGA 1086 0.4457 MGIYLSTPKTEKASEDGENDRVRYGLSSMQGWRATMEDAHAAHPDLDESTSLFGVYDGHGGKAVAKFCAKYLHRQVLKHEAYVAGDLGTSLQKTFLRMDEMMRGQRGWRELAVLGDNIEKLSGMLEGFIWSPKSGDVNDHFDDWALEEGPHSDFSGPNCGCTACVAVIQGNQLVVANAGDSRCVLSRKGQAHNLSKDHKPDLEVERDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTADPDINSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHGQLKTEKKLSVVCERVFDRCLAPTAGGEGCDNMTMILIQFKKPSSPGASVVDKPLSSAQPSEADKSSAKIESK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0092 361 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Glsi07g0092 361 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Glsi07g0092 361 SMART PP2C_4 13 326 IPR001932 -
Glsi07g0092 361 Gene3D - 1 329 IPR036457 -
Glsi07g0092 361 MobiDBLite consensus disorder prediction 332 361 - -
Glsi07g0092 361 PANTHER PROTEIN PHOSPHATASE 2C 18 327 IPR015655 GO:0004722|GO:0006470
Glsi07g0092 361 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Glsi07g0092 361 MobiDBLite consensus disorder prediction 338 353 - -
Glsi07g0092 361 Pfam Protein phosphatase 2C 140 313 IPR001932 -
Glsi07g0092 361 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Glsi07g0092 361 CDD PP2Cc 22 328 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0092 Glsi-ChrGlsi07 563384 570549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0092 1 332 PP2C-type Phosphatase Gene Family AT2G25070 77.177 0.0 561