Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0082 ATGGAGAAGAAGAAGTATCCCATTGGACCCGACCATTATGTTCTCTACGAGGAGATTGGCCAGGGCGTCAGTGCCTCTGTGCACCGTGCTCTTTGTCTACCCTTCAATGAGATCGTTGCCATCAAAATTCTTGATTTTGAGAGGGACAATTCCGATCTGAATAACATTTCTCGTGAAGCACAGACAATGATCTTAATTGACCACCCTAATGTCCTTAAATCACGCTGCTCCTTTGTTAGCGATCATAATCTGTGGGTTGTCATGCCATATATGGCCGGTGGTTCTTGTCTTCACATCTTGAAAGCTGCCTACCCCGATGGTTTTGAGGAGGTTGTAATAGCCACAATATTGCGAGATGTATTAAAGGGTTTAGAATATCTTCATCATCATGGGCATATACATCGTGATGTTAAAGCTGGGAACATTCTAATTGATGCACGTGGCACAATCAAGCTTGGAGATTTTGGTGTATCTGCTTGTCTTTTTGATTCAGGCAACAGGCAACGCACAAGGAATACATTCGTGGGGACACCCTGCTGGATGGCACCTGAGGTCATGGAGCAACTGCATGGTTATGACTTCAAAGCTGATATCTGGTCATTCGGTATAACTGCATTGGAGCTTGCACATGGTCATGCTCCATTCTCAAAATTTCCGCCAATGAAGGTACTGCTCACGACACTGCAACATGCACCCCCTGGTCTTGATTATGAAAGGGATAAAAAGTTCTCTAAGTCATTTAAACAGATGATTGCTAGTTGTTTAGTGAAAGATCCTTCAAAACGACCACCGGCCAAAAAGTTGTTAAAGCATCCCTTCTTTAAGCAGGCTCGCTCAAATGATTATATTTTACGAACACTTTTGGAGGGGCTACCTGCTTTAGGTGATCGCATGAAGGCCCTAAAGGTTCCAACTTATCAAAATGAATTCTTTTCTTCCCCTGTAATGATAGAAAATATATTTATAGGGTGA 972 0.428 MEKKKYPIGPDHYVLYEEIGQGVSASVHRALCLPFNEIVAIKILDFERDNSDLNNISREAQTMILIDHPNVLKSRCSFVSDHNLWVVMPYMAGGSCLHILKAAYPDGFEEVVIATILRDVLKGLEYLHHHGHIHRDVKAGNILIDARGTIKLGDFGVSACLFDSGNRQRTRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKFPPMKVLLTTLQHAPPGLDYERDKKFSKSFKQMIASCLVKDPSKRPPAKKLLKHPFFKQARSNDYILRTLLEGLPALGDRMKALKVPTYQNEFFSSPVMIENIFIG 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0082 323 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 303 IPR047173 GO:0043539
Glsi07g0082 323 FunFam Serine/threonine-protein kinase BLUS1 2 90 - -
Glsi07g0082 323 Gene3D Transferase(Phosphotransferase) domain 1 94 298 - -
Glsi07g0082 323 Pfam Protein kinase domain 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0082 323 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Glsi07g0082 323 SUPERFAMILY Protein kinase-like (PK-like) 11 289 IPR011009 -
Glsi07g0082 323 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Glsi07g0082 323 SMART serkin_6 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0082 323 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0082 323 CDD STKc_OSR1_SPAK 11 274 - -
Glsi07g0082 323 FunFam serine/threonine-protein kinase BLUS1 isoform X1 94 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0082 Glsi-ChrGlsi07 521184 523510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0082 1 302 MAP Kinase Kinase Kinase Kinase AT1G79640 86.424 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Glsi07g0082 Pkinase 2.6e-60 CL0016