Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0074 ATGGAGTCAACTACTGTGGTGGTGCTGGTGGTTCTTTCAATTTCAGTAGTGGGTTCCCATGGGTACCGAGCCATTGTAGCGAAGGATGGGAGTGGAGATTACATGAGTATACGTGAAGCCATAGCCAAAGCTCCACACAGGAGCGCCAAACCATATACCATCCACGTTCGAAGAGGGACTTACCAAGAGTTTGTCATCATTCCATCTGGGAAAACTAACATAAAGCTCATCGGCGATGGTCCTCAACATACTAAAATTGTTGGCTACCAAAATGGTATCACAATAGATATCCATGGGGACGGGTTCATGGCCCAAAACATAGCATTTGTGAGCTTAGCAAGCCTGAACGCAAGCGCAGCAGTTGCCGTTCGTAACGAAGCAAATAAAAGCATATTCTTCCAATGCTCCATTGAAGGCTTTCAAGACACACTCTGGGCTGTTTCTGGTAGACAATTTTACAAAAACTGCGACATCTACGGCACCGTGGACTTCATCTATGGCGATGCAGCTGCCGTGTTTCAAGACTGCACGGTTTATGCAAGGTACCGAAAGTACGTGACCTTCACTGCTCAGTCGCGAGAGAACCCTAATGAGAACACGGGCTTCACATTCCAAAGGTGCAAATTCACAATGTCACCGGAGGACTCACACAGAAAGTCAGAGGTTCATGCCACCTTGGGTAGGCCATGGAGGCCCTACTCCACGGTGGCCATCATGGAGTCTTACATAGACTCCATGGTGGACCCTAAAGGTTGGGAAGAGATGCCCGGCCACCCTGCCCATATGGTGACCTACGTGGAGTTCAACAATGTTGGACCTGGATCTGGGACGAAAGGAAGAGTTAAATGGCCGGGTGTTAGAGTCCTTGAGGACCCAAACGATGCACAGCCTTTCACTCCTTCACTTCTGTTGGATGCTGACTCTTGGATTCCCATCAAAGGTGTTCCCTATGATAATGGGTTGTAG 966 0.4865 MESTTVVVLVVLSISVVGSHGYRAIVAKDGSGDYMSIREAIAKAPHRSAKPYTIHVRRGTYQEFVIIPSGKTNIKLIGDGPQHTKIVGYQNGITIDIHGDGFMAQNIAFVSLASLNASAAVAVRNEANKSIFFQCSIEGFQDTLWAVSGRQFYKNCDIYGTVDFIYGDAAAVFQDCTVYARYRKYVTFTAQSRENPNENTGFTFQRCKFTMSPEDSHRKSEVHATLGRPWRPYSTVAIMESYIDSMVDPKGWEEMPGHPAHMVTYVEFNNVGPGSGTKGRVKWPGVRVLEDPNDAQPFTPSLLLDADSWIPIKGVPYDNGL 321
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0074 321 SUPERFAMILY Pectin lyase-like 24 319 IPR011050 -
Glsi07g0074 321 Pfam Pectinesterase 24 306 IPR000070 GO:0030599|GO:0042545
Glsi07g0074 321 Gene3D - 22 321 IPR012334 -
Glsi07g0074 321 PANTHER PECTINESTERASE 23 311 - -
Glsi07g0074 321 FunFam Pectinesterase 4 21 321 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi07g0074 Glsi-ChrGlsi07 478323 480482 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0074 25 321 Carbohydrate Esterase AT3G05620 41.935 1.41e-80 253