Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0073 ATGCACCATCTCCGCCACCCAAAACCACTCCTCACCAACCCCTCCGTTCCGATTCTGCCCACCAACCTGACGTCTCCCATTACTCTTTTGCATTTCCATTTCTACCCTCATACCATATCCTTAATCCCCATTTTGTCCCTCCACCAACCACCGCTTCCTTTTATTGCAATCATACTCTCCTCTCCCTCCTCAGGGCAGAGTTTCAAACGCAAACACCCACTCTCTGTTCTCTCTCTCGTCTTCCTCACCAATCATTCATTCAGTTTCATTCATCTAATGGCTACTGAGACGAAGCAACAAAAGGACTTCATTTTCAGGTCCAAACTTCCTGATATCTACATCCCCAAACACCTTCCCCTCCATTCTTATTGCTTTGAGAACCTTTCAGAGTTTGGATCACGCCCCTGTTTGATCAATGCCCCAACAGGGGACATCTACACCTACTACGACGTGGAGCTCACTGCCCGTAGAGTCGCCTCCGGGCTGAACAACATGGGCATCCAACAAGGTGATGTGATCATGGTTTTGCTGTCCAATTCACCAGAATTTGTGTTTGCTTTTCTGGGTGCATCTTATCGTGGTGCCATGATCACTGCTGCCAACCCCTTCTTCACACCGGCTGAGATTGCAAAACAAGCAAAAGCCTCCAACTCAAAGCTGCTTGTAACCCAAGCTTGTTACTACGAGAAAGTGAAGGATTTGGACGTGAAGCTCATGTTCGTAGACTCTGCCCCAGAAGGGTACTCGCATTTCTCAGAGCTATCTGGGGCAGACGAGAATGAAATGCCAGAAGTGGAAATTAAAGCTGATGATGTGGTGGCATTGCCTTATTCGTCAGGGACAACTGGGTTACCAAAAGGGGTGATGTTAACACACAAAGGGTTGGTGACTAGCATAGCACAGCAAGTGGATGGGGAAAACCCCAACCTGTATTTCCACAGCGAGGATGTGATTCTGTGTGTGCTTCCCCTGTTTCACATCTACTCCCTCAACTCTGTTTTGCTATGTGGGTTAAGAGCCAAAGCTGCCATCTTGTTAATGCCAAAGTTCGAGATAAAAGGGTTGCTGGGTTTGATAGAGAAACAAAAAGTGACAATAGCCCCAGTTGTGCCACCCATAGTGTTGGCCATTTCAAAGTCACCAGATCTTGATAAGTACGACCTTTCTTCCGTTAGGGTGTTGAAGTCTGGAGGGGCCCCTCTGGGCAAGGAACTAGAGGACGCTATGAGGGCTAAGTTCCCAAAGGCCAAACTTGGTCAGGGATATGGGATGACAGAGGCAGGGCCAGTTCTGACGATGAGCTTAGGATTTGCCAAGGAAGCCTTGGATGTAAAAGCAGGAGCATGTGGAACCGTTGTGAGAAATGCAGAAATGAAGATTGTGGACCCTGAAACTGCTGAATCTTTGCCTCGAAACCAGCCCGGTGAGATCTGCATCAGAGGTGACCAAATCATGAAAGGTTATCTGAATGATCCGGAGGCTACAAAAAGAACCATCGACGAAGACGGGTGGCTGCACACGGGAGACATAGGGTTCATCGACGATGACGACGAGCTGTTCATCGTGGATAGGCTGAAGGAACTGATAAAGTACAAAGGGTTCCAGGTTGCACCAGCTGAACTTGAAGCCCTGCTTCTGTCTCATCCTCACATCTCGGATGCCGCTGTGGTCCCAATGAAGGATGAAGCAGCAGGAGAGGTGCCTGTGGCATTTGTTGTGAGATGCAATGGTCATACAGACACCACCGAGGATGAAATTAAGCAGTTCGTCTCAAAACAGGTGGTGTTTTATAAGAGAATAAACAGAGTATTCTTCATTGATGCCATTCCCAAGTCACCCTCTGGCAAGATCTTACGAAAGGATCTAAGAGCTAAGCTGGCTGCTGTTGCTGTTGCCGTTGCTGCTTCTAATTAA 1914 0.4801 MHHLRHPKPLLTNPSVPILPTNLTSPITLLHFHFYPHTISLIPILSLHQPPLPFIAIILSSPSSGQSFKRKHPLSVLSLVFLTNHSFSFIHLMATETKQQKDFIFRSKLPDIYIPKHLPLHSYCFENLSEFGSRPCLINAPTGDIYTYYDVELTARRVASGLNNMGIQQGDVIMVLLSNSPEFVFAFLGASYRGAMITAANPFFTPAEIAKQAKASNSKLLVTQACYYEKVKDLDVKLMFVDSAPEGYSHFSELSGADENEMPEVEIKADDVVALPYSSGTTGLPKGVMLTHKGLVTSIAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLCGLRAKAAILLMPKFEIKGLLGLIEKQKVTIAPVVPPIVLAISKSPDLDKYDLSSVRVLKSGGAPLGKELEDAMRAKFPKAKLGQGYGMTEAGPVLTMSLGFAKEALDVKAGACGTVVRNAEMKIVDPETAESLPRNQPGEICIRGDQIMKGYLNDPEATKRTIDEDGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPHISDAAVVPMKDEAAGEVPVAFVVRCNGHTDTTEDEIKQFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAVAVAVAASN 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0073 637 CDD 4CL 114 622 - -
Glsi07g0073 637 Pfam AMP-binding enzyme C-terminal domain 540 616 IPR025110 -
Glsi07g0073 637 Gene3D - 526 630 IPR045851 -
Glsi07g0073 637 FunFam Long-chain-fatty-acid--CoA ligase FadD 106 526 - -
Glsi07g0073 637 Pfam AMP-binding enzyme 128 531 IPR000873 -
Glsi07g0073 637 FunFam 4-coumarate--CoA ligase 2 527 629 - -
Glsi07g0073 637 Gene3D - 97 525 IPR042099 -
Glsi07g0073 637 ProSitePatterns Putative AMP-binding domain signature. 275 286 IPR020845 -
Glsi07g0073 637 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 100 624 - -
Glsi07g0073 637 SUPERFAMILY Acetyl-CoA synthetase-like 98 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0073 Glsi-ChrGlsi07 474750 477409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0073 97 594 Monolignol Biosynthesis Gene Families AT1G51680 70.784 0.0 715