Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0071 ATGGTGGGAGTTGTTCATCAATCTTTACTGGGCTCAATCTTGTCAAATATGCTTCTGATTCCTGGATGCGCCTTCTTCAGTGATGAAATCGTCCACTCCCAAAGGTTTCAGGTTTTCAACAAGGAAGCTGCTGTTATAGACTCTGGGTTGCTTTTGATGGCCGTGACGGGAATGCTGTTTCCTGCTATGCTTCACTTTACTCACTCAGAAATTCATTTCCCCAAGTCACAGTTATACCTATCCAGATTTGGCAACTTCATAATGCTTGTGGCATATGCCAGTTACCTGTATTTTCAATTTACAAGTCAGCAGAATCTTTATACTCTTACTGAGGGGATGGGTTCTGTAGAGGAGAAAATAGACCTCGTTTCTGATGAGGAGATTCCTTTTAGCTCATCACCATCTGCAAGGAAAGTCCATACATTTGATTTTGAGACAACACATGTACTTTCTCCTGTAAATTTGGCCAGTTCATCCATCTTTAAGCAAATAGGGATACGGCCTATCAGGAGCCTATATATTGTCTTAATTCGAGCGAAGATCAACATGTTGCTACCTTTTGGTCCCTTGGCCATATTGCTACATTATCTGACGGGAAAGCATGGATGGGTGTTCTTTTTCAGCTTATTGGGTATTACTCCCTTGGCAGAACGTTTGGGATATGCTACTGAGCAGCTCGCATTGTACACAGGATCAACAGTCGGGGGTCTGCTGAATGCCACATTTGGCAATGCAACTGAAATGATTATATCAATTTATGCTTTGAAAAATGGGATGATTAGGGTTGTTCAGCAATCTTTGTTGGGCTCAATTTTGTCAAATATGCTTCTAGTTCTTGGATGTGCCTTCTTCACTGGCGGGGTTGTCCACTACAAAAAGATTCAAGTTTTTAATAAGGCAGCTGCTGTTGTAAATTCTGGGTTGCTCTTGATGGCTGTAATGGGAATACTGTTTCCTGCTGTGCTTCACTTTACTCACTCAGAGGTTCATTTTGGGAAATCAGAGTTATCTCTATCCAGATTTAGCAGCTGTATAATGCTAATAGCATATGCAAGCTACCTTTTCTTTCAGTTAAGGAGTCAGCATAATCTTTATAGTCCTATTGAACAGGAAGCTGATAGAACTGAAAATTATGACGAGGAGGAAGAAGTTGAATTAACTCAATGGGAAGCAATAGGTTGGCTTGCTATTTTGACAATATGGGTATCTATATTGTCTGGATATCTTGTGGATGCCATACAGGGGGCATCTGAGTCATTGAATATGCCTGTGGCTTTTATTAGTGTCATCTTGCTTCCAATTGTAGGCAATGCTGCAGAACATGCAAGTGCTATCATGTTTGCCATGAAGGATAAGCTTGATATCACAATTGGAGTTGCTATTGGATCATCTACACAGATATCTATGTTTGTGATCCCTTTCTGTGTGGTTGTTGGGTGGTGCATGGGAAAAGAAATGGACTTGAACTTCCAACTGTTTGAGACAGCCACACTTTTTATCACTGTGCTTGTAGTAGCATTTATGTTGCAGGAAGGGACCTCAAATTATTTTAAAGGCTTGATGCTTATTCTATGCTATCTTATCGTTGCGGCCAGTTTTTTCGTACATGTAGACCCGACAGATGGTGAGTTTCTAAAAATATACTCATAA 1650 0.4055 MVGVVHQSLLGSILSNMLLIPGCAFFSDEIVHSQRFQVFNKEAAVIDSGLLLMAVTGMLFPAMLHFTHSEIHFPKSQLYLSRFGNFIMLVAYASYLYFQFTSQQNLYTLTEGMGSVEEKIDLVSDEEIPFSSSPSARKVHTFDFETTHVLSPVNLASSSIFKQIGIRPIRSLYIVLIRAKINMLLPFGPLAILLHYLTGKHGWVFFFSLLGITPLAERLGYATEQLALYTGSTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGVVHYKKIQVFNKAAAVVNSGLLLMAVMGILFPAVLHFTHSEVHFGKSELSLSRFSSCIMLIAYASYLFFQLRSQHNLYSPIEQEADRTENYDEEEEVELTQWEAIGWLAILTIWVSILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITIGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPTDGEFLKIYS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0071 549 Gene3D - 2 120 IPR044880 -
Glsi07g0071 549 Gene3D - 231 370 IPR044880 -
Glsi07g0071 549 Gene3D - 378 535 IPR044880 -
Glsi07g0071 549 FunFam Vacuolar cation/proton exchanger 232 371 - -
Glsi07g0071 549 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 167 539 IPR004713 GO:0006812|GO:0008324|GO:0016020
Glsi07g0071 549 Pfam Sodium/calcium exchanger protein 203 358 IPR004837 GO:0016020|GO:0055085
Glsi07g0071 549 Pfam Sodium/calcium exchanger protein 392 531 IPR004837 GO:0016020|GO:0055085
Glsi07g0071 549 NCBIfam calcium/proton exchanger 184 534 IPR004798 GO:0006816|GO:0015369
Glsi07g0071 549 NCBIfam calcium/proton exchanger 175 534 - -
Glsi07g0071 549 FunFam Vacuolar cation/proton exchanger 379 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0071 Glsi-ChrGlsi07 464984 472187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0071 169 542 Antiporters AT3G13320 76.330 0.0 589