Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0070 ATGAGGCCAATTCAGCCACCGCCTAACGCTAGTGCATCCAATCGTGACCGTTCGCGCCGACGTCCTGACTTGAAGAACTTGACTTTACCGTTGCCGCCACGAGACTCGCCACTAGCGGTGCCTCTTCCTCTTCCCCCACCCAACTCGGCACCGTCAACGAGTCAGCACGCCGGCCCAACTCACCACCAACTGGTCCCCTTCTCCGAGCTCGAACGACTCAATCGAATCGGTAGCGGAAGCGGTGGCACCGTCTATAAGGTCTTCCACCGACCCTCCGGTCGGGTTTTCGCGCTTAAGGTTATATACGGTCACCATGAAGACTCCGTGCGCCGACAGATCCATCGGGAAATCCAGATCCTTCGGGACGTGGATGACCCGAACGTCGTCAGGTGCCATGACATGTACGATCACAACGGCGAAATCCAAGTCCTTCTCGAGTTCATGGACGGTGGGTCCTTAGAAGGGAAACACATCCCCCACGAGCAACAGCTCGCAGATCTAGCTCGTCAGATTCTCCGTGGTCTGGCCTACCTCCACCGCCGCCACATCGTTCACCGAGATATCAAGCCGTCGAACCTTTTGATCAACTCGCGCAACCAGGTCAAGATTGCTGATTTCGGGGTGGGCCGGATTCTGGCGCAAACCATGGATCCGTGTAATTCATCGGTGGGCACGATCGCTTATATGAGCCCTGAGAGAATCAACACAGACATCAATGATGGACACTACGATGCGTATGCTGGGGATATATGGAGCCTTGGGGTGAGTATATTGGAATTTTACATGGGTAGATTTCCATTTGCGGTGGGGAGGCAAGGAGATTGGGCAAGCTTGATGTGTGCGATTTGTATGTCTCAGCCGCCGGAGGCACCGGCGATGGCGTCGATAGAGTTTAGAGATTTTATATCCCGCTGCTTGCAGAGAGATCCCTCGCGGAGGTGGCCCGCCTCTAGATTGTTGGGGCACCCTTTTATAGCTCAGGGAAATGGACACCAGAACTCGGTTCATCAGAATCTTCATCAACTACTACCTCCGCCTCGGCCTCTTTCTTCGTAG 1056 0.5473 MRPIQPPPNASASNRDRSRRRPDLKNLTLPLPPRDSPLAVPLPLPPPNSAPSTSQHAGPTHHQLVPFSELERLNRIGSGSGGTVYKVFHRPSGRVFALKVIYGHHEDSVRRQIHREIQILRDVDDPNVVRCHDMYDHNGEIQVLLEFMDGGSLEGKHIPHEQQLADLARQILRGLAYLHRRHIVHRDIKPSNLLINSRNQVKIADFGVGRILAQTMDPCNSSVGTIAYMSPERINTDINDGHYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPAMASIEFRDFISRCLQRDPSRRWPASRLLGHPFIAQGNGHQNSVHQNLHQLLPPPRPLSS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0070 351 Gene3D Phosphorylase Kinase; domain 1 50 149 - -
Glsi07g0070 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Glsi07g0070 351 Pfam Protein kinase domain 71 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0070 351 Gene3D Transferase(Phosphotransferase) domain 1 152 342 - -
Glsi07g0070 351 MobiDBLite consensus disorder prediction 1 61 - -
Glsi07g0070 351 SUPERFAMILY Protein kinase-like (PK-like) 67 345 IPR011009 -
Glsi07g0070 351 FunFam Mitogen-activated protein kinase 2 150 337 - -
Glsi07g0070 351 CDD PKc_MAPKK_plant_like 68 330 - -
Glsi07g0070 351 ProSiteProfiles Protein kinase domain profile. 70 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0070 351 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Glsi07g0070 351 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 33 327 - -
Glsi07g0070 351 SMART serkin_6 70 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0070 351 FunFam Mitogen-activated protein kinase 2 50 149 - -
Glsi07g0070 351 MobiDBLite consensus disorder prediction 34 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0070 Glsi-ChrGlsi07 458106 459161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0070 1 341 MAP Kinase Kinase Gene Family AT1G51660 70.255 2.50e-171 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Glsi07g0070 Pkinase 2.5e-62 CL0016