Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0061 ATGGGCCATCTCTTGGTGCTTCTTTGCTTTTCTTGCTTCTTCTTTTCTGTTTCTTCTTTGAGCTCTGATGGGGTGACTCTCTTGTCACTCTTGAGGCACTGGACGTCTGTGCCTCATCCCATAAACTCGAGCTGGAATTCCTCTGATTCTACTCCTTGCTCATGGGTGGGAGTCCATTGCGACCATGCCCACAATGTGGTATCCCTTAACCTCACCAATTACGGGATTGTTGGTCAACTAGGGCCTGAGATTGGACTTTTGAGTCACTTGCAGAGCTTGGCATTGCTGACCAACGGATTCTCTGGGAAAATGCCTCTCGAGCTAGGAAATTGTAGTCGACTAGGGCACTTGGACCTTTCTGACAACTACTTCAGCGGGCAAATCCCTGAGAGCTTCAAAAACTTGCTAAATTTGGAGTATATCAGCCTTTCTACAAATCTACTGACTGGTGAAATTCCAGAATCCTTGGTTCAAATTCCTCACCTGCAACTTGTCGACCTGACTTATAACACTCTAAGTGGCCCCATCCCTTCAAGTATTGGAAACATGACTGAGCTTTCGATGCTGTATCTACATGATAATGAGTTGTCAGGGACAATTCCCTCATCCTTTGGTAATTGCAGTAAATTACAGGATTTGTATTTGAATGGGAATCAGTTGCAGGGAATCCAGCCTGAGACTCTAAACAATCTCCATAATCTTGTTAATTTGGACTTCAGCGGTAATGGTTTAAGGGGCACTATTCCATTGGGTTCTGGCAGCTGTAAAAAGTTATTTTTTTTGGATCTGTCATTCAATGTATTTAGTGGTGGCATTCCGTCAGGCTTGGGGAATTGTAGTGGTTTAACAGAATTTGCTGCTGTGAACAGTAGCTTAGTTGGCAGTATCCCATCCTCCTTTGGCCTACTGCTTGAGCTTTCTATTCTACGCCTTCCTGAGAACCATTTGTCTGGAAAAATACCTCCAGAAATTGGCAATTGTAAGTCTTTGAAAGAGCTACACTTGTATTCCAATGAAATTGAGGGAGAAATTCCAAGTGAACTGGGAAAGTTGAGTGAATTACAAGATCTTGAATTGTTTTCCAACCGTTTGACTGGTGAAATTCCTCTCTGTATCTGGAAGATTCGAAGTCTCGAGCATATCCTTGTGTACAATAACAACCTTTCTGGGGAGCTGCCTTTGGAGATGACAGAGCTCAAGCAACTGAAAAATATCTCATTGTTTGACAACCAGTTCTCTGGAGTCGTACCTCAAAACTTGGGAATTAATAGCAGTTTAGTACAGTTGGACTTTACAAATAACAAGTTCACTGGAAACATCCCACCAAATCTTTGTTTTGGAAAGAAATTAATTATACTGAATATGGGCCTCAATCAACTTCAAGGTAGCATACCTCCTGATGTAGGAAGATGTACAACTCTTACAAGGGTGATTCTTAAAGAAAATAATTTTACAGGGCCTCTTCCTGAGTTTGAAAGTAATCCAAATCTCACTTTCATGAATATCAGCACAAACAGTATCAACGGAACAATTCCATCAAGTTTGGGAAACTGCACAAATCTCACTGATTTAACTTTGTCACATAACAACTTTATGGGTCATATACCCCCCGAGCTAGGAAATCTTGTGAACCTTCAGGCATTGGATCTTGCTCACAACAACTTAGAAGGTCCTTTGCCACCTCAGCTGTCAAATTGTACCAAAATGGACAGGTTTGATGTGGGATTCAATTTCCTAAATGGTTCATTTCCATCAAGTTTGAGGAGCTGGACGAAGCTAACCATATTAATACTAAGAGAGAATAATTTTAGTGGGGGCATCCCAGCTTTCTTGTCGGAATTTAACAAGGTTTCTGAGCTACAACTTGGTGGAAATATGTTTGGAGGCAAAATTCCTAGATCGATTGGAGCATTGCAGAATCTGTTGTATGGGTTGAATCTAAGTGCTAATGGGCTAATAGGTGAGGTTCCTTTAGAGATTGGAAACCTGAAAATGCTGCAAAGCCTGGATCTATCTCGGAACAATTTGACTGGGAGCATAGAAGTGCTTGATGAGCTCCCTTCATTATCTGAAATCAACATTTCATACAATTCCTTTGAAGGTCCTGTCCCGAAGATGCTGATAAATTTGCTTAATTCTCCTAAATCATCATTTTTGGGCAATCCTGGCCTATGTGTAAGTTGTTCATCACCAAATAGCTTGATTTGCAATAAAAGCAGCTATATAAAGCCGTGTGACAATAAATCAACTGATCGGAAGGGTCTCAGTAGAGTTAAATTTGTGATGATAGCACTTGGATCCTCAATATTTTTTGTGTTTCTGCTGCTGGGACTAGTTTATATGTTTGTCTTTAGCAGAAAATCTAAGCAGGAAGTCATTATATCTGCCGAAGAAGGTACTTCGTCGCTTCTTAAGAAAGTGATGGAGGCTACATCACACCTAAACGATCGGTATATTATCGGTAGAGGAGCCCACGGAGTTGTTTATAGAGCTCAATTAGATGTAGCCCAAGCTTTTGCTGTAAAGAAGCTTGCATTTGCTGGGAACAAAGGAAAGAGCTTAAGCATGGTCAGAGAAATTCAAACCCTTGGAAAGATTAGGCACCGAAATCTAGTGAGATTGGAAGACTTTTGGTTGAGAAAGGACTTTGGTCTAATATTGTACAGGTACATGCCAAATGGAAGCCTTCATGATGTTTTGCATGAAAAGAATCCACCACCATCCTTAGAGTGGAATGTCAGGTATAAGATAGCCGTTGGAATTGCTCATGGATTGGCTTATCTCCATTATGACTGTGATCCTGCCATAGTTCACAGGGACATCAAACCAAAAAATATACTTTTAGATACTGATATGGAGCCTCATATTGCTGACTTCGGTATTGCCAAGCTTTTGGACCAATCTTCTACTTCAACACCTTCTATATCTGTTCCTGGCACAGTAGGGTATATTGCACCTGAGAATGCATATACAACAGCAAATAATAGGGAGTCTGATGTATACAGTTACGGGGTGGTTTTGCTTGAGTTGATAACCAGAAAGAAGGCATTAGATCCATCATTTATGGAGGGAATTGATATAGTGGAATGGGTCAGATCCCTCTGGAAGGAAACAGGAGATATTGATAACATAGTTGACTCGAGCCTCGCAGAGGAGTTTTTGGATTCAAATGTATTGGAAAAAGTTACCAACGCTCTTTTGGTGGCTTTGAGATGCACCGAGAAGGATCCGCATATGAGACCCACAATGAGAGATGTTATCAAGCAATTAGTAGATGCTAATCCCCGCACAAGAGGCAAAAAGGTCTAG 3309 0.4107 MGHLLVLLCFSCFFFSVSSLSSDGVTLLSLLRHWTSVPHPINSSWNSSDSTPCSWVGVHCDHAHNVVSLNLTNYGIVGQLGPEIGLLSHLQSLALLTNGFSGKMPLELGNCSRLGHLDLSDNYFSGQIPESFKNLLNLEYISLSTNLLTGEIPESLVQIPHLQLVDLTYNTLSGPIPSSIGNMTELSMLYLHDNELSGTIPSSFGNCSKLQDLYLNGNQLQGIQPETLNNLHNLVNLDFSGNGLRGTIPLGSGSCKKLFFLDLSFNVFSGGIPSGLGNCSGLTEFAAVNSSLVGSIPSSFGLLLELSILRLPENHLSGKIPPEIGNCKSLKELHLYSNEIEGEIPSELGKLSELQDLELFSNRLTGEIPLCIWKIRSLEHILVYNNNLSGELPLEMTELKQLKNISLFDNQFSGVVPQNLGINSSLVQLDFTNNKFTGNIPPNLCFGKKLIILNMGLNQLQGSIPPDVGRCTTLTRVILKENNFTGPLPEFESNPNLTFMNISTNSINGTIPSSLGNCTNLTDLTLSHNNFMGHIPPELGNLVNLQALDLAHNNLEGPLPPQLSNCTKMDRFDVGFNFLNGSFPSSLRSWTKLTILILRENNFSGGIPAFLSEFNKVSELQLGGNMFGGKIPRSIGALQNLLYGLNLSANGLIGEVPLEIGNLKMLQSLDLSRNNLTGSIEVLDELPSLSEINISYNSFEGPVPKMLINLLNSPKSSFLGNPGLCVSCSSPNSLICNKSSYIKPCDNKSTDRKGLSRVKFVMIALGSSIFFVFLLLGLVYMFVFSRKSKQEVIISAEEGTSSLLKKVMEATSHLNDRYIIGRGAHGVVYRAQLDVAQAFAVKKLAFAGNKGKSLSMVREIQTLGKIRHRNLVRLEDFWLRKDFGLILYRYMPNGSLHDVLHEKNPPPSLEWNVRYKIAVGIAHGLAYLHYDCDPAIVHRDIKPKNILLDTDMEPHIADFGIAKLLDQSSTSTPSISVPGTVGYIAPENAYTTANNRESDVYSYGVVLLELITRKKALDPSFMEGIDIVEWVRSLWKETGDIDNIVDSSLAEEFLDSNVLEKVTNALLVALRCTEKDPHMRPTMRDVIKQLVDANPRTRGKKV 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0061 1102 ProSiteProfiles Protein kinase domain profile. 814 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0061 1102 SMART LRR_typ_2 135 159 IPR003591 -
Glsi07g0061 1102 SMART LRR_typ_2 303 327 IPR003591 -
Glsi07g0061 1102 SMART LRR_typ_2 542 566 IPR003591 -
Glsi07g0061 1102 SMART LRR_typ_2 183 207 IPR003591 -
Glsi07g0061 1102 SMART LRR_typ_2 208 230 IPR003591 -
Glsi07g0061 1102 SMART LRR_typ_2 231 255 IPR003591 -
Glsi07g0061 1102 SMART LRR_typ_2 663 686 IPR003591 -
Glsi07g0061 1102 SUPERFAMILY Protein kinase-like (PK-like) 800 1090 IPR011009 -
Glsi07g0061 1102 ProSiteProfiles Leucine-rich repeat profile. 665 687 IPR001611 GO:0005515
Glsi07g0061 1102 SUPERFAMILY L domain-like 64 196 - -
Glsi07g0061 1102 Pfam Leucine rich repeat 113 172 IPR001611 GO:0005515
Glsi07g0061 1102 Pfam Leucine rich repeat 185 244 IPR001611 GO:0005515
Glsi07g0061 1102 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 178 272 - -
Glsi07g0061 1102 Pfam Leucine Rich Repeat 544 566 IPR001611 GO:0005515
Glsi07g0061 1102 FunFam Serine/threonine-protein kinase-like protein CCR4 891 1102 - -
Glsi07g0061 1102 ProSitePatterns Protein kinases ATP-binding region signature. 820 843 IPR017441 GO:0005524
Glsi07g0061 1102 Gene3D Ribonuclease Inhibitor 184 253 IPR032675 -
Glsi07g0061 1102 SMART serkin_6 814 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0061 1102 SUPERFAMILY L domain-like 440 739 - -
Glsi07g0061 1102 ProSitePatterns Serine/Threonine protein kinases active-site signature. 936 948 IPR008271 GO:0004672|GO:0006468
Glsi07g0061 1102 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 448 734 - -
Glsi07g0061 1102 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 19 177 - -
Glsi07g0061 1102 Gene3D Ribonuclease Inhibitor 254 471 IPR032675 -
Glsi07g0061 1102 PANTHER LEUCINE RICH REPEAT KINASE 2 372 1099 - -
Glsi07g0061 1102 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 780 890 - -
Glsi07g0061 1102 Gene3D Ribonuclease Inhibitor 21 179 IPR032675 -
Glsi07g0061 1102 FunFam Predicted protein 295 394 - -
Glsi07g0061 1102 Gene3D Transferase(Phosphotransferase) domain 1 891 1100 - -
Glsi07g0061 1102 Pfam Protein kinase domain 819 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0061 1102 SUPERFAMILY RNI-like 175 530 - -
Glsi07g0061 1102 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Glsi07g0061 1102 Gene3D Phosphorylase Kinase; domain 1 784 890 - -
Glsi07g0061 1102 Gene3D Ribonuclease Inhibitor 490 747 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0061 Glsi-ChrGlsi07 422211 425609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0061 11 1098 Receptor kinase-like Gene Family AT1G73080 53.993 0.0 1108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi07g0061 Pkinase 5.1e-44 CL0016