Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0053 ATGTTGCTTTTGCCAATGGAGAATCTTGAAGCCACCAGGCAGCATTTGCAAACTAGCTTAGAAAAATCAGGCGCCATTGCTTCTGCATTAGATGAGGCAGGGTCAAGATTGGAGCTACTCAACCAAAAATGCCAATCCTTGGAAGCTGCATTTAGACCCATCTTTACGCAAAAATGCTCTCTTGTTGACATTGGAGACCGTATCGATGGTGTTCTATGTTCTGCAGCTGCAGTCGTCAAGGTGTTTGACGCCATTCATCCGCTGCAGAAATCTCTCTTGGCTGACCCCAGTTCTGATCTTTGCTCGTATGTCTCGGACGTAAAGAAGCACGAAGAGGCACTGAAGCTTCTCACCGATAATTGCAAGCTAGCACTTTGCTGGTTGCAGGGCATTTTTGAGTTGTTGCAAGACAAAGCTATCACCAACAATGAGCTTTACCTATTGAATGTGAAGAAATCTTTAAGAATATTACAAGAATTGCAGGTCATGGAAGAAAAGGCCCGCCTTGATGGAGGCCTTCTCAGTGCTGCCTTTGACAAATTAGAGATTGAGTTCCAGCGGCTTCTGGTAGTAAACACGATGCCTCTTCCTTTAGTTTCATTAGCATCACCAACTGGTCAGCGAGGCAGCATTGGCATTCAAGCTTTGCCAGCTTCTGTTACAGGGAAGTTGCAGGCCATTATAGAGAGATTAACTGCTAATGACAGGCTAGACAAGTGTGTATCTATATACGTTGAAGTTCGAGGAATGAATGCTCGAAGAAGCTTGCAGGCTTTAGATTTGAGTTACCTTGAGATTCCACCCGCTAAGTTTGAGGATGTATATAGTATAGAGAATTACATAGAACAATGGGGTATGCATTTGGAGTTGGTTGTGAAGCAGCTGCTTGAGATGGAGTACAGGTTCTCCAATAAAATCTTTGAGAAAATTGGTAAAGAAGCATGGGTGAGATGTTTTGCCAAGATTGCCATTGAATCAGGGATTCTTTCTTTCCTTCAATTTGGAAGAAATGTTGCTGAGAGTAAGAACGACCCCATCAAGTTGTTGAAGCTGCTGGACATATTCAGAGTCTTGAACGACCTAAGACTAAAATTCAATCAGCTTTTCAGTGGGGAAGCTTGTGAGGAAATTAGAAGTGTGACTAAGGATCTTATCAGTAGGGTCGTCAATGGAGCCTGCGAGATATTCTGGGAACTTCCAGCTCAAGTGAAGTTGCAACGGCCAAGTTCTCCTCCCCCAGATGGCAGCGTTCCCCGGCTGGTAAGCTTTGTTACTGATTACTGCAACCAGCTTCTTGGGGATACTTATAGGCCACTTCTGATACAAGTTCTGGAAATCCATCTTAGCTGGAGAAAGGAAGTATATGAAGAGTGTATTATCTTCACCCAGGTTTTTAACATAATTAAGGAAATTGCTGTTAATTTGGATGCTTGGTCAAAGGCACATGAAGATATCACTTTGTCCTACCTTTTTATGATGAATAATCATTGCCATTTTTTCAACTTGAGGGGCACTATGGTTGGGAATATGATGGGAGATTCATGGTTAAGAGCACATGAACAATATAAGGAGTATTACGCGGCAATTTATCTGAAGGATAGCTGGGGAAAGTTAGTGCCTATTCTGAATAAAAAAGATATAATTTCATCCTCTGCCTCTGCCTCTGCCTCTGGTGGGAGAGTGAGGAACCAAGATTTGGTTAAGAGACTGAACGCTTTCAATGTGGGTTTTGATGAAATGTATAAGAAGCAATCAAATTGGGTAATATCGGATGAGAAGTTGAGGGAGAAAGTGCTCGAGTATTTGGTGGAAGGCATAGTACCAAGCTATAGAAGCTACGTGAAGAACTACAGTTTGTCAATTGAGAATGATGCAAAGGCAGCAAAGCATATAAAGTACACGGCGCAAAGCTTGGAGAAGATGCTAAGGTCCCTGTTTCAGCCAAAGGTGAGCAAGTATGGGAGCATCAAACGAGCACACTTTATTAGTAAAATAAAACAAGTGAGCCATCAATTTCGCTTTACTCTAGCTACCGTGTAA 2040 0.4245 MLLLPMENLEATRQHLQTSLEKSGAIASALDEAGSRLELLNQKCQSLEAAFRPIFTQKCSLVDIGDRIDGVLCSAAAVVKVFDAIHPLQKSLLADPSSDLCSYVSDVKKHEEALKLLTDNCKLALCWLQGIFELLQDKAITNNELYLLNVKKSLRILQELQVMEEKARLDGGLLSAAFDKLEIEFQRLLVVNTMPLPLVSLASPTGQRGSIGIQALPASVTGKLQAIIERLTANDRLDKCVSIYVEVRGMNARRSLQALDLSYLEIPPAKFEDVYSIENYIEQWGMHLELVVKQLLEMEYRFSNKIFEKIGKEAWVRCFAKIAIESGILSFLQFGRNVAESKNDPIKLLKLLDIFRVLNDLRLKFNQLFSGEACEEIRSVTKDLISRVVNGACEIFWELPAQVKLQRPSSPPPDGSVPRLVSFVTDYCNQLLGDTYRPLLIQVLEIHLSWRKEVYEECIIFTQVFNIIKEIAVNLDAWSKAHEDITLSYLFMMNNHCHFFNLRGTMVGNMMGDSWLRAHEQYKEYYAAIYLKDSWGKLVPILNKKDIISSSASASASGGRVRNQDLVKRLNAFNVGFDEMYKKQSNWVISDEKLREKVLEYLVEGIVPSYRSYVKNYSLSIENDAKAAKHIKYTAQSLEKMLRSLFQPKVSKYGSIKRAHFISKIKQVSHQFRFTLATV 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0053 679 Gene3D Exocyst complex component Exo70 132 653 - -
Glsi07g0053 679 Pfam Exo70 exocyst complex subunit 283 643 IPR046364 GO:0000145|GO:0005546|GO:0006887
Glsi07g0053 679 SUPERFAMILY Cullin repeat-like 78 646 IPR016159 -
Glsi07g0053 679 Coils Coil 30 50 - -
Glsi07g0053 679 PANTHER EXOCYST COMPLEX PROTEIN EXO70 74 646 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0053 Glsi-ChrGlsi07 392523 394562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0053 6 679 EXO70 exocyst subunit family AT4G31540 52.339 0.0 692