Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0049 ATGGTTACTTCTCAGGTTATAGGCTTGTCAAATTTACTAAAATCAAGTTCTGAGAAAGGAATTAATGGGGATGAAGCTGATCTATTAAACAGGAGAACTGCATTTGGAACAAATACATATCCTCGGAAAAAGGGTAGAAGTTTCTGGAGGTTTCTATGGGAAGCTTGGCAAGATCTGACCCTTATTATATTGATTATAGCAGCTGCAGTGTCATTGGCGCTTGGAATAAAAACAGAGGATATGGGAGAAATTAGGTTTGGGGGACATGTGCTTTACATTTATTGTGTGTGA 291 0.3814 MVTSQVIGLSNLLKSSSEKGINGDEADLLNRRTAFGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAAVSLALGIKTEDMGEIRFGGHVLYIYCV 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0049 96 Gene3D - 27 53 - -
Glsi07g0049 96 Gene3D - 54 80 - -
Glsi07g0049 96 SUPERFAMILY Calcium ATPase, transmembrane domain M 9 83 IPR023298 -
Glsi07g0049 96 PANTHER CATION TRANSPORTING ATPASE 6 81 - -
Glsi07g0049 96 SMART Cation_ATPase_N_a_2 5 76 IPR004014 -
Glsi07g0049 96 Pfam Cation transporter/ATPase, N-terminus 8 71 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0049 Glsi-ChrGlsi07 359880 360348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0049 6 79 Primary Pumps ATPases AT4G29900 74.324 4.34e-33 118