Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0048 ATGACATCCACCTCTCGTGGTTCCAACTCCTCCACCAATAGCCTCATCACCGTCACCATCGATAGGCATCATGACGATGCTCCCCCTCTCCCTCTCCCTCTCCCTCTCCCTCCTCCTCCTCCCTCAAACAACAACTACAATGGCGGCAACGATGACGACTTCCCTGCGGATCCCGATGATCCTTTCGACGTCGCTTGCACCAAGAATGCACCGCCCGAGACCTTTCAGCGATGGAGACAAGCAGCACTAGTGCTCAATGCTTCCCGGCGTTTTCGTTATACTCTGGACTTGAAAAAGGAAGAAGAGAATCAACGAAAGAAAAACTTGATTAGAGCCCATGCACAAGCAGCATTGCTTTTCAGATTGGCTGGTGAACGTGAACTAGTAGCAGTGGCATCCCCAAGGACCCCAACTCGAGTCGATGACTATGCAATTGGGCTTGAACAACTTGTCTCAATGTCTAAGGATCACAATATTTCTGCTTTACAACATCATGGAGGGGCACGTTTGCTTTGA 516 0.5019 MTSTSRGSNSSTNSLITVTIDRHHDDAPPLPLPLPLPPPPPSNNNYNGGNDDDFPADPDDPFDVACTKNAPPETFQRWRQAALVLNASRRFRYTLDLKKEEENQRKKNLIRAHAQAALLFRLAGERELVAVASPRTPTRVDDYAIGLEQLVSMSKDHNISALQHHGGARLL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0048 171 MobiDBLite consensus disorder prediction 29 44 - -
Glsi07g0048 171 MobiDBLite consensus disorder prediction 1 58 - -
Glsi07g0048 171 MobiDBLite consensus disorder prediction 1 18 - -
Glsi07g0048 171 Pfam Ca2+-ATPase N terminal autoinhibitory domain 59 102 IPR024750 GO:0005516
Glsi07g0048 171 Gene3D - 72 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0048 Glsi-ChrGlsi07 357450 359820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0048 8 169 Primary Pumps ATPases AT3G21180 45.455 6.10e-40 141