Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0043 ATGAAAGGAAGCCTTTGTGAGCTTTGTAACGAAGATGCGTCCCTGTATTGCGCCTCCGATTCTGCGTTTCTCTGCTGGAATTGCGATGCCACCACTCATGAGGCAAACTTTCTAGTAGCTCGCCATATCCGAGAGGTGCTCTGCCGCAATTGTAAGTGTTTCGCCGGTAACCAGATCTCCGGCGGCATAGCTCGCCCCGCTGCGTCTACCTGTCGTTCTTGCTCGCCGGACAATCACTCCCGTGACGATTCCGTATCTTCGTCTTCGTTGTCGTCGTGCGTTTCAACTAACGAGTCTTGCGCTCCAGCTCCGAAGAAGATTAGACTGGACGATCGGCGCTTGAGGAACAAAGTCGCTTCTTCCAGTTCCGTCGGTGATGAGAACTGCAACACTCCGGCGAGAATAGTAATGAAAGGGCAGAGGAAGGAGAGAGAATGTCGAGGGAGAAATCTGGGATGGTGTGCGGCGGAGGAGGTTTTGGTGCATTGGAGCAGAAAGTTAGGGGTGAATGGTAATTACGTAGCTTCATTGGCGTCGCAGGCCTTGGGAAAGTTGAGGGTTGTTCCCTTCAGAGTAGCGGTGGCCACGTCGTTTTGGTTCGGATTGAGATATTGTGGGGAAGGGTCGTTGCATACGTTTCAGAATCTGAGAAAGTTAGAGGCAATGTCGAGAGTGCCGGCAGAGGTAATCGTGGGGGCGGAGGCGAAGCTGGCACGCGCGCTGAGACAGAGGAGTACAAGTCCCGTATTGGAAGAAGGATGGGCCGAGTGCTAA 774 0.5336 MKGSLCELCNEDASLYCASDSAFLCWNCDATTHEANFLVARHIREVLCRNCKCFAGNQISGGIARPAASTCRSCSPDNHSRDDSVSSSSLSSCVSTNESCAPAPKKIRLDDRRLRNKVASSSSVGDENCNTPARIVMKGQRKERECRGRNLGWCAAEEVLVHWSRKLGVNGNYVASLASQALGKLRVVPFRVAVATSFWFGLRYCGEGSLHTFQNLRKLEAMSRVPAEVIVGAEAKLARALRQRSTSPVLEEGWAEC 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0043 257 CDD Bbox1_BBX-like 5 44 - -
Glsi07g0043 257 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Glsi07g0043 257 Pfam B-box zinc finger 4 42 IPR000315 GO:0008270
Glsi07g0043 257 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 89 - -
Glsi07g0043 257 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0043 Glsi-ChrGlsi07 336018 336791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0043 4 256 C2C2-CO-like Transcription Factor Family AT3G21150 32.567 9.88e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi07g0043 zf-B_box 7.2e-07 No_clan