Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0025 ATGGATTCGAAGAAGTCTAACAAGATCAGAGAGATTGTCAGGCTTCAACAAATCCTCAAGAAGTGGAAGAAGGTTGCAAATGCTTCCAAGAACAACTCTGTCCCCTCTTCAACAGCCAGCAGCCGCAATAGTAATGGCAGTAAAGGCATCAAGTTCTTGAAAAGAACTCTGTCATTCACGGATGTTTCATCCAACGACATCGTCCCGAAAGGGTTTCTTTCTGTTTGCGTTGGAAAAGAGGTCAAGAGGTTCATCATCCCAACAGAGTACTTGAGACACCAAGCATTTGAGGTTTTATTGAGAGAAGCCGAAGAGGAATTTGGTTTCCAGCAAGAGGGAGTGCTCAAAATTCCATGCCAAGTATCAATTTTTGAGAAAATATTGAAGGTAGTGGAAGACAAAAAACAAGTCTTTTTCTTGCATGAAGATCAAAAGGACATAATTACTTGTTACGCATCAGACTGTGAGGTTACACCCACTCACCATGCTCAAACGTGTAGGTGA 504 0.4187 MDSKKSNKIREIVRLQQILKKWKKVANASKNNSVPSSTASSRNSNGSKGIKFLKRTLSFTDVSSNDIVPKGFLSVCVGKEVKRFIIPTEYLRHQAFEVLLREAEEEFGFQQEGVLKIPCQVSIFEKILKVVEDKKQVFFLHEDQKDIITCYASDCEVTPTHHAQTCR 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0025 167 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 127 IPR003676 GO:0009733
Glsi07g0025 167 Pfam Auxin responsive protein 20 130 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0025 Glsi-ChrGlsi07 213621 214124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0025 1 167 Calmodulin-binding Proteins AT2G24400 55.495 5.62e-60 182