Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi07g0003 | ATGAAACTACAGGCACACATTACAGGACAGTTGTCGGGTCAGGTACCTAATCAAGCGGGGTCCCAGTTGCCTGGACTGACTCAACCTAATGGAAATGCCCTCCCTCCTCAGATGCCTAGCTTAGGTGGTGTTCCACGTTCAACCATAAATATGGACCCTGAATTTCATACAGTGCGCTCTTTTATGCAAGATAAGATCTATCATATATTATTGCAGCGGCACCAGCAGCCAGCTCCAGAAGGACATAGAAGGAAGTTTAAGGATCTTGCTAAACGCCTAGAGGAGGCAATGTTAAAAGCTGCACACTCTAAGGAGGACTACATGAACTTGGATACATTAGAGAGTCGTTTGTTTAATTGCATCAGACGATCATCTATGAATAGTCAAAACCAACAATATCCACAGGTTGTCAGCTCTTCTCCAATTGGTACAATGATACCAACACCTGGTATGTCATCTGTTGTGAATTCAAGCATGGTGGTTGCATCTTCTGTTGATGCCTCAATGATTGCTGCCAATGGATGTAATAGCTTAGCATCTACATCTATGAATAGTGGAAGCATATTTGTAACTGGTGGCTTGCATGGCAATTCCTTAAGTAGATCTGATGGTTTTTCTAATGGCTATCAGCAGTCTTCTACCAGCTTTTCCATTGGTTCTGGGGGAAACATGTCCTCAATGGGTGTGCAGAGAATTGCAGGCCAGATGATTCCCACTCCTGGATTTAATGGCGGCAGTAATCACTCCTACATGAATGTAGAAACTTCTAATAATAGCGGCGCCTTTTCCAGTGTTGAATCTACAATGGTACCTCAGCCGCAGCAGCAGAAGCAGCATGTTGGTGGCCAAAACAGTCATGTATTGCAGAGCCTTGGCAGCCAAATGGATAGTGGATTGAGATCTGGTTTACAGCAAAAATCTTTTGCATACTCAAATGGAGCTATAAGTGGTGGGCTGGGCTTGAACGGAAACAACATGCAGCTTGCCAATGAACCTGGCACTTCTGATGGCTATGCAACAACTTATTCTAATTCCCCTAAACACTTAGAGCAGCACTTTGATCAAAATCAGCAACCACCAATGCAGGGTGATGGATATGGATTGAGCAACGTTGACTCTCTTGGTTCTGGAAACTTCTATGCATCTGCAACATGTGGATCTATGATGAACACTCAAAACTTGAATTCAGTAAAATTGCCTGCAATACCCAAAACCAGCTCTCTGAGAAGTAGTCAGTCGAATTTGCACAGCATGCAGCAGGGTGTTCATCTAAAGTCTCAAGCAATTAATCAGTTGGAAAAGTTGAATTTTCAGTCTTCTTTGACTTCAAGAGATGGTCTTCTGCATCCTCAACAGCAGTATCAGCAAAGGCCGCAGCAATTTCAACAGCCAGATCAGTATGCTCAACAGCAATTTCAACTTAAGCTGCAAAGTCAACAGCCTCAGCATTTGGTCAGCGGGGATGCTTTCAGTCAGTCTCTGCTTTCCTCCAATCTAGAAAGCCAAGTGAAGTCTGAGCCTGGAGTCGAAAACCATAAAGAAGTGCTCAATTCTCTGGTTTCTGAACAGTTTCATATTTCTGAGATGCAAAACCAGTTCCAGCAGAACTCTACTGAAGATATCTCTAGGGGTGCTCAACTTCTTTCTTTTCCAACTGGACAGAATGATTTATCCTTGTCAGTATCTCAAAATTCGCAACAAAAGTTGCACCCGCATCAGTTGATTTCAGAGTCTGAAAACAATTTTAGCTGTCTTCCAATTGGGGCACAGTCTAAATCAGCACTTCTAAGTCAATGGAATTCTCAATCACGGGATGGTAACAACATAGTTGGGAATATGTCACATGAGCAGCATCTGCACATGGATTTCCATCAGAGAATATCACGGCAAGATGAAGCTCAATGCAATAATTTATCATCAGATGGATCTATTGTTGGTCAAGCTGTTGCTTCTAGAGGATCAGATGAGCCGCTTGACTCAGGCGGTTCTATCAAGAAAGCGCACAGGAACCAACAGAGGTGGCTTTTATTTCTGCTCCATGCTCGACGTTGTCCTGCTCCTGAAGGACGATGCCAAGAGCGATATTGTTATAGTGCCCAGAAGTTATGTAGACACATAGATGGATGCAAGCTGCCTCATTGTACATATCCCCGCTGTCATCATACCAGGCTATTGCTTGTTCATTTCAGAAACTGCAAGGATCCAGGTTGCCCTGTTTGTGTTTTTGTTCGAAATTATCGACGCTCATTCCATCTTAAGCCTCAAATCCGGCCAGATCCTGTAGTTCCATCTCCTAGATTGATCCCAAAACCTCTCCCTATGATTGAAACTACAGAAGACCTGCAGCCATCTATAAAACGCATGAAGATTGAGCAGTGTACCCAGTCCTTTAATCCCGATAATGACAACTCTGCTATATCAGTTTCTGTCAACTGTGAATCTCTAGTTTCCAAGGATGCACAGTGCCAAAACTATCCCCATGGCGAGATGACTATGGCAATTAAATCTGAGCTTACAGAAGTTAAGGCAGAAATTCCAGTGCAATTGGTACATGGACATCTTAGTGAAGTGAATATGAGTAATGCAGATAACAGAAGGCCTGGTGGTGAACCTGTCACATTTGATGAGCCTGCTAATTCAGCAAGGCAAGAAAATTTCAAAACTGAGAAAGAAACTAGACAAGATAAGCCTGTGAGTGTGACTCAGCCATCTGAAAATGCTGTGGGAACCAAGTCTGGTAAGCCCAAAATAAAAGGGGTCTCGTTAACTGAACTATTTACTCCAGAGCAAGTCAGGGAACATATCACTGGCCTCAGGCAATGGGTTGGCCAAAGCAAAGCCAAAGCAGAAAAGAATCAAGCAATGGAGAGCTTGATGAGTGAGAACTCCTGTCAGTTGTGTGCAGTAGAGAAGCTTACCTTTGAACCACCACCTATTTATTGCACAACTTGCGGTGCTCGCATTAAACGAAATGCCATGTATTATACCATGGGTGCTGGTGACACACGGCATTATTTTTGCATTCCATGCTATAATGAGGCTCGTGGAGACACCATTATTGCTGATGGAACTGCCATTCCTAAGGCGAGGCTGGAAAAAAAGAGAAATGATGAGGAAACTGAGGAATGGTGGGTTCAGTGTGATAAATGCGAAGCTTGGCAACATCAAATTTGTGCCTTATTTAATGGTCGAAGAAATGATGGGGGACAAGCTGAATACACCTGCCCTAACTGCTATATTCAAGAGATAGAAAGAGGAGAGCGCAAACCCTTACCCCAAAGTGCTGTTCTCGGAGCCAAGGATTTGCCAAGAACTATTCTCAGTGACCAAATAGAGCAACGGTTATTTAGGCGACTAAAGCAAGAAAGGCAAGAGAGGGCAAGGCTTCAAGGAAAAAGTTATGATGAGGTGCCTGGGGCTGAAGCACTTGTTGTGAGAGTTGTGTCATCTGTAGACAAGAAGCTAGAAGTGAAACAGCGATTTTTGGAAATTTTTCAGGAAGAAAATTACCCAACAGAATTCCCATATAAATCAAAGGTAGTATTGTTGTTTCAGAAGATTGAAGGGGTGGAGGTATGCCTGTTTGGCATGTATGTTCAAGAATTTGGATCTGAAAGTCAATTTCCTAATCAGCGTCGGGTGTATCTTTCATATCTCGACTCTGTGAAGTATTTTAGGCCTGAGGTTAAGGCAGTGACTGGAGAGGCTCTTCGGACGTTTGTTTATCATGAAATTCTGATTGGATACCTCGAATATTGCAAGAAACGCGGTTTTACAAGCTGCTATATATGGGCCTGTCCTCCGTTGAAGGGTGAAGATTATATTTTATATTGTCATCCAGAAATCCAGAAAACTCCTAAATCTGATAAGCTTCGGGAATGGTATCTATCAATGTTAAGAAAAGCCGCCAAGGAGAAAATTGTGGTTGATCTTACCAATTTATACGACCATTTCTTTGTATCCACTGGTGAATGTAAGGCTAAGGTTACAGCTGCAAGACTTCCATATTTTGATGGCGACTACTGGCCAGGGGCTGCAGAAGATTTGATTTATCAGCTTCGCCAAGAGGAAGATGGCAGAAAACAAAATAAGAAAGGAACAACAAAAAAAACTATAACAAAAAGGGCTTTAAAAGCCTCTGGTCAGTCTGATCTTTCTGGAAATGCCTCGAAAGATCTACTCCTAATGCATAAACTTGGTGAAACCATTTGCCCGATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGCGTGCAGTCACTGTTGTATTTTAATGGTGTCTGGCAACCGTTGGGTTTGCAACCAGTGCAAGAATTTTCAGATTTGCGATAAGTGTTATGAAGCAGAACAAAAGCGTGAAGAAAGAGAAAGCCATCCTATTAATCAGAGGGAAAAACATACCCTTTACCGAATTGAAATTACTGATGTACCAGCTGATACAAAGGACAAAGATGAGATTCTTGAGAGTGAATTTTTTGACACTAGACAGGCATTTTTGAGTCTCTGTCAGGGAAATCATTATCAGTATGATACTCTAAGGCGGGCCAAACATTCTTCAATGATGGTCCTCTATCATCTTCATAATCCAACTGCTCCTGCTTTTGTGACAACTTGTAATATATGTCATCTTGACATAGAGACTGGTCAAGGTTGGCGTTGCGAAGTTTGCCCTGATTATGATGTATGCAATGCTTGTTATCAAAAGGATGGAGGCATTGATCATCCTCATAAGTTGACAAATCATCCATCAATGGCTGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGCTTCGAGTATTGCAGCTACGGAAAATGCTTGATCTTCTTGTGCATGCATCCCAATGTCGTTCTGCGCATTGCCAGTATCCAAACTGTCGCAAAGTGAAGGGGCTTTTCCGTCATGGGATACAATGCAAAACACGTGCCTCAGGAGGCTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTTCAACTTCATGCTCGTGCTTGCAAAGAATCCGAGTGCCATGTTCCACGATGCAGAGATTTAAAAGAACATTTAAAGAGGTTGCAGCAGCAATCTGATTCCCGGCGAAGAGCGGCTGTGATGGAGATGATGAGACAGAGAGCTGCAGAAGTTGCTAACAATGCATGA | 5136 | 0.4272 | MKLQAHITGQLSGQVPNQAGSQLPGLTQPNGNALPPQMPSLGGVPRSTINMDPEFHTVRSFMQDKIYHILLQRHQQPAPEGHRRKFKDLAKRLEEAMLKAAHSKEDYMNLDTLESRLFNCIRRSSMNSQNQQYPQVVSSSPIGTMIPTPGMSSVVNSSMVVASSVDASMIAANGCNSLASTSMNSGSIFVTGGLHGNSLSRSDGFSNGYQQSSTSFSIGSGGNMSSMGVQRIAGQMIPTPGFNGGSNHSYMNVETSNNSGAFSSVESTMVPQPQQQKQHVGGQNSHVLQSLGSQMDSGLRSGLQQKSFAYSNGAISGGLGLNGNNMQLANEPGTSDGYATTYSNSPKHLEQHFDQNQQPPMQGDGYGLSNVDSLGSGNFYASATCGSMMNTQNLNSVKLPAIPKTSSLRSSQSNLHSMQQGVHLKSQAINQLEKLNFQSSLTSRDGLLHPQQQYQQRPQQFQQPDQYAQQQFQLKLQSQQPQHLVSGDAFSQSLLSSNLESQVKSEPGVENHKEVLNSLVSEQFHISEMQNQFQQNSTEDISRGAQLLSFPTGQNDLSLSVSQNSQQKLHPHQLISESENNFSCLPIGAQSKSALLSQWNSQSRDGNNIVGNMSHEQHLHMDFHQRISRQDEAQCNNLSSDGSIVGQAVASRGSDEPLDSGGSIKKAHRNQQRWLLFLLHARRCPAPEGRCQERYCYSAQKLCRHIDGCKLPHCTYPRCHHTRLLLVHFRNCKDPGCPVCVFVRNYRRSFHLKPQIRPDPVVPSPRLIPKPLPMIETTEDLQPSIKRMKIEQCTQSFNPDNDNSAISVSVNCESLVSKDAQCQNYPHGEMTMAIKSELTEVKAEIPVQLVHGHLSEVNMSNADNRRPGGEPVTFDEPANSARQENFKTEKETRQDKPVSVTQPSENAVGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKAKAEKNQAMESLMSENSCQLCAVEKLTFEPPPIYCTTCGARIKRNAMYYTMGAGDTRHYFCIPCYNEARGDTIIADGTAIPKARLEKKRNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEIERGERKPLPQSAVLGAKDLPRTILSDQIEQRLFRRLKQERQERARLQGKSYDEVPGAEALVVRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSESQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAAKEKIVVDLTNLYDHFFVSTGECKAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETICPMKEDFIMVHLQHACSHCCILMVSGNRWVCNQCKNFQICDKCYEAEQKREERESHPINQREKHTLYRIEITDVPADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICHLDIETGQGWRCEVCPDYDVCNACYQKDGGIDHPHKLTNHPSMADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGIQCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLKRLQQQSDSRRRAAVMEMMRQRAAEVANNA | 1711 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi07g0003 | 1711 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1031 | 1079 | IPR013083 | - | |
Glsi07g0003 | 1711 | MobiDBLite | consensus disorder prediction | 882 | 896 | - | - | |
Glsi07g0003 | 1711 | ProSitePatterns | Zinc finger PHD-type signature. | 1007 | 1078 | IPR019786 | - | |
Glsi07g0003 | 1711 | SUPERFAMILY | TAZ domain | 668 | 747 | IPR035898 | - | |
Glsi07g0003 | 1711 | Gene3D | - | 1410 | 1467 | IPR043145 | - | |
Glsi07g0003 | 1711 | Pfam | Histone acetylation protein | 1136 | 1359 | IPR013178 | GO:0004402|GO:0006355|GO:0016573 | |
Glsi07g0003 | 1711 | SMART | KAT11_2 | 1129 | 1426 | IPR013178 | GO:0004402|GO:0006355|GO:0016573 | |
Glsi07g0003 | 1711 | FunFam | Histone acetyltransferase HAC1-like protein | 1591 | 1708 | - | - | |
Glsi07g0003 | 1711 | Coils | Coil | 1674 | 1694 | - | - | |
Glsi07g0003 | 1711 | MobiDBLite | consensus disorder prediction | 859 | 915 | - | - | |
Glsi07g0003 | 1711 | SUPERFAMILY | TAZ domain | 1596 | 1679 | IPR035898 | - | |
Glsi07g0003 | 1711 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Glsi07g0003 | 1711 | FunFam | Histone acetyltransferase of the CBP family 12 | 1410 | 1469 | - | - | |
Glsi07g0003 | 1711 | PANTHER | CBP/P300-RELATED | 86 | 1703 | IPR013178 | GO:0004402|GO:0006355|GO:0016573 | |
Glsi07g0003 | 1711 | ProSitePatterns | Zinc finger ZZ-type signature. | 1539 | 1566 | IPR000433 | GO:0008270 | |
Glsi07g0003 | 1711 | Pfam | TAZ zinc finger | 672 | 740 | IPR000197 | - | |
Glsi07g0003 | 1711 | Pfam | TAZ zinc finger | 1604 | 1674 | IPR000197 | - | |
Glsi07g0003 | 1711 | SUPERFAMILY | FYVE/PHD zinc finger | 1039 | 1080 | IPR011011 | - | |
Glsi07g0003 | 1711 | ProSiteProfiles | CBP/p300-type histone acetyltransferase (HAT) domain profile. | 1096 | 1532 | IPR031162 | GO:0004402 | |
Glsi07g0003 | 1711 | ProSiteProfiles | Zinc finger TAZ-type profile. | 662 | 743 | IPR000197 | - | |
Glsi07g0003 | 1711 | SUPERFAMILY | RING/U-box | 1394 | 1466 | - | - | |
Glsi07g0003 | 1711 | ProSiteProfiles | Zinc finger ZZ-type profile. | 1534 | 1587 | IPR000433 | GO:0008270 | |
Glsi07g0003 | 1711 | SMART | PHD_3 | 980 | 1079 | IPR001965 | - | |
Glsi07g0003 | 1711 | Gene3D | TAZ domain | 1591 | 1708 | IPR035898 | - | |
Glsi07g0003 | 1711 | Pfam | Zinc finger, ZZ type | 1536 | 1575 | IPR000433 | GO:0008270 | |
Glsi07g0003 | 1711 | ProSiteProfiles | Zinc finger TAZ-type profile. | 1594 | 1677 | IPR000197 | - | |
Glsi07g0003 | 1711 | ProSiteProfiles | Zinc finger ZZ-type profile. | 1414 | 1477 | IPR000433 | GO:0008270 | |
Glsi07g0003 | 1711 | Gene3D | TAZ domain | 662 | 748 | IPR035898 | - | |
Glsi07g0003 | 1711 | SMART | TAZ_2 | 665 | 743 | IPR000197 | - | |
Glsi07g0003 | 1711 | SMART | TAZ_2 | 1597 | 1675 | IPR000197 | - | |
Glsi07g0003 | 1711 | FunFam | Histone acetyltransferase HAC1 | 1533 | 1584 | - | - | |
Glsi07g0003 | 1711 | CDD | PHD_HAC_like | 1006 | 1078 | - | - | |
Glsi07g0003 | 1711 | Gene3D | - | 1533 | 1585 | IPR043145 | - | |
Glsi07g0003 | 1711 | SUPERFAMILY | RING/U-box | 1515 | 1583 | - | - | |
Glsi07g0003 | 1711 | Pfam | PHD-finger | 1037 | 1079 | IPR019787 | - | |
Glsi07g0003 | 1711 | Coils | Coil | 1112 | 1132 | - | - | |
Glsi07g0003 | 1711 | SMART | zz_5 | 1533 | 1579 | IPR000433 | GO:0008270 | |
Glsi07g0003 | 1711 | SMART | zz_5 | 1413 | 1457 | IPR000433 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi07g0003 | Glsi-ChrGlsi07 | 39499 | 52524 | Dispersed/Proximal |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TAZ | Glsi07g0003 | HAT_KAT11 | 1.7e-31 | CL0257 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Glsi07g0003 | 07 | 39499 | 52524 | Glsi07g0003 | 07 | 39499 | 52524 | ECH |