Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0003 ATGAAACTACAGGCACACATTACAGGACAGTTGTCGGGTCAGGTACCTAATCAAGCGGGGTCCCAGTTGCCTGGACTGACTCAACCTAATGGAAATGCCCTCCCTCCTCAGATGCCTAGCTTAGGTGGTGTTCCACGTTCAACCATAAATATGGACCCTGAATTTCATACAGTGCGCTCTTTTATGCAAGATAAGATCTATCATATATTATTGCAGCGGCACCAGCAGCCAGCTCCAGAAGGACATAGAAGGAAGTTTAAGGATCTTGCTAAACGCCTAGAGGAGGCAATGTTAAAAGCTGCACACTCTAAGGAGGACTACATGAACTTGGATACATTAGAGAGTCGTTTGTTTAATTGCATCAGACGATCATCTATGAATAGTCAAAACCAACAATATCCACAGGTTGTCAGCTCTTCTCCAATTGGTACAATGATACCAACACCTGGTATGTCATCTGTTGTGAATTCAAGCATGGTGGTTGCATCTTCTGTTGATGCCTCAATGATTGCTGCCAATGGATGTAATAGCTTAGCATCTACATCTATGAATAGTGGAAGCATATTTGTAACTGGTGGCTTGCATGGCAATTCCTTAAGTAGATCTGATGGTTTTTCTAATGGCTATCAGCAGTCTTCTACCAGCTTTTCCATTGGTTCTGGGGGAAACATGTCCTCAATGGGTGTGCAGAGAATTGCAGGCCAGATGATTCCCACTCCTGGATTTAATGGCGGCAGTAATCACTCCTACATGAATGTAGAAACTTCTAATAATAGCGGCGCCTTTTCCAGTGTTGAATCTACAATGGTACCTCAGCCGCAGCAGCAGAAGCAGCATGTTGGTGGCCAAAACAGTCATGTATTGCAGAGCCTTGGCAGCCAAATGGATAGTGGATTGAGATCTGGTTTACAGCAAAAATCTTTTGCATACTCAAATGGAGCTATAAGTGGTGGGCTGGGCTTGAACGGAAACAACATGCAGCTTGCCAATGAACCTGGCACTTCTGATGGCTATGCAACAACTTATTCTAATTCCCCTAAACACTTAGAGCAGCACTTTGATCAAAATCAGCAACCACCAATGCAGGGTGATGGATATGGATTGAGCAACGTTGACTCTCTTGGTTCTGGAAACTTCTATGCATCTGCAACATGTGGATCTATGATGAACACTCAAAACTTGAATTCAGTAAAATTGCCTGCAATACCCAAAACCAGCTCTCTGAGAAGTAGTCAGTCGAATTTGCACAGCATGCAGCAGGGTGTTCATCTAAAGTCTCAAGCAATTAATCAGTTGGAAAAGTTGAATTTTCAGTCTTCTTTGACTTCAAGAGATGGTCTTCTGCATCCTCAACAGCAGTATCAGCAAAGGCCGCAGCAATTTCAACAGCCAGATCAGTATGCTCAACAGCAATTTCAACTTAAGCTGCAAAGTCAACAGCCTCAGCATTTGGTCAGCGGGGATGCTTTCAGTCAGTCTCTGCTTTCCTCCAATCTAGAAAGCCAAGTGAAGTCTGAGCCTGGAGTCGAAAACCATAAAGAAGTGCTCAATTCTCTGGTTTCTGAACAGTTTCATATTTCTGAGATGCAAAACCAGTTCCAGCAGAACTCTACTGAAGATATCTCTAGGGGTGCTCAACTTCTTTCTTTTCCAACTGGACAGAATGATTTATCCTTGTCAGTATCTCAAAATTCGCAACAAAAGTTGCACCCGCATCAGTTGATTTCAGAGTCTGAAAACAATTTTAGCTGTCTTCCAATTGGGGCACAGTCTAAATCAGCACTTCTAAGTCAATGGAATTCTCAATCACGGGATGGTAACAACATAGTTGGGAATATGTCACATGAGCAGCATCTGCACATGGATTTCCATCAGAGAATATCACGGCAAGATGAAGCTCAATGCAATAATTTATCATCAGATGGATCTATTGTTGGTCAAGCTGTTGCTTCTAGAGGATCAGATGAGCCGCTTGACTCAGGCGGTTCTATCAAGAAAGCGCACAGGAACCAACAGAGGTGGCTTTTATTTCTGCTCCATGCTCGACGTTGTCCTGCTCCTGAAGGACGATGCCAAGAGCGATATTGTTATAGTGCCCAGAAGTTATGTAGACACATAGATGGATGCAAGCTGCCTCATTGTACATATCCCCGCTGTCATCATACCAGGCTATTGCTTGTTCATTTCAGAAACTGCAAGGATCCAGGTTGCCCTGTTTGTGTTTTTGTTCGAAATTATCGACGCTCATTCCATCTTAAGCCTCAAATCCGGCCAGATCCTGTAGTTCCATCTCCTAGATTGATCCCAAAACCTCTCCCTATGATTGAAACTACAGAAGACCTGCAGCCATCTATAAAACGCATGAAGATTGAGCAGTGTACCCAGTCCTTTAATCCCGATAATGACAACTCTGCTATATCAGTTTCTGTCAACTGTGAATCTCTAGTTTCCAAGGATGCACAGTGCCAAAACTATCCCCATGGCGAGATGACTATGGCAATTAAATCTGAGCTTACAGAAGTTAAGGCAGAAATTCCAGTGCAATTGGTACATGGACATCTTAGTGAAGTGAATATGAGTAATGCAGATAACAGAAGGCCTGGTGGTGAACCTGTCACATTTGATGAGCCTGCTAATTCAGCAAGGCAAGAAAATTTCAAAACTGAGAAAGAAACTAGACAAGATAAGCCTGTGAGTGTGACTCAGCCATCTGAAAATGCTGTGGGAACCAAGTCTGGTAAGCCCAAAATAAAAGGGGTCTCGTTAACTGAACTATTTACTCCAGAGCAAGTCAGGGAACATATCACTGGCCTCAGGCAATGGGTTGGCCAAAGCAAAGCCAAAGCAGAAAAGAATCAAGCAATGGAGAGCTTGATGAGTGAGAACTCCTGTCAGTTGTGTGCAGTAGAGAAGCTTACCTTTGAACCACCACCTATTTATTGCACAACTTGCGGTGCTCGCATTAAACGAAATGCCATGTATTATACCATGGGTGCTGGTGACACACGGCATTATTTTTGCATTCCATGCTATAATGAGGCTCGTGGAGACACCATTATTGCTGATGGAACTGCCATTCCTAAGGCGAGGCTGGAAAAAAAGAGAAATGATGAGGAAACTGAGGAATGGTGGGTTCAGTGTGATAAATGCGAAGCTTGGCAACATCAAATTTGTGCCTTATTTAATGGTCGAAGAAATGATGGGGGACAAGCTGAATACACCTGCCCTAACTGCTATATTCAAGAGATAGAAAGAGGAGAGCGCAAACCCTTACCCCAAAGTGCTGTTCTCGGAGCCAAGGATTTGCCAAGAACTATTCTCAGTGACCAAATAGAGCAACGGTTATTTAGGCGACTAAAGCAAGAAAGGCAAGAGAGGGCAAGGCTTCAAGGAAAAAGTTATGATGAGGTGCCTGGGGCTGAAGCACTTGTTGTGAGAGTTGTGTCATCTGTAGACAAGAAGCTAGAAGTGAAACAGCGATTTTTGGAAATTTTTCAGGAAGAAAATTACCCAACAGAATTCCCATATAAATCAAAGGTAGTATTGTTGTTTCAGAAGATTGAAGGGGTGGAGGTATGCCTGTTTGGCATGTATGTTCAAGAATTTGGATCTGAAAGTCAATTTCCTAATCAGCGTCGGGTGTATCTTTCATATCTCGACTCTGTGAAGTATTTTAGGCCTGAGGTTAAGGCAGTGACTGGAGAGGCTCTTCGGACGTTTGTTTATCATGAAATTCTGATTGGATACCTCGAATATTGCAAGAAACGCGGTTTTACAAGCTGCTATATATGGGCCTGTCCTCCGTTGAAGGGTGAAGATTATATTTTATATTGTCATCCAGAAATCCAGAAAACTCCTAAATCTGATAAGCTTCGGGAATGGTATCTATCAATGTTAAGAAAAGCCGCCAAGGAGAAAATTGTGGTTGATCTTACCAATTTATACGACCATTTCTTTGTATCCACTGGTGAATGTAAGGCTAAGGTTACAGCTGCAAGACTTCCATATTTTGATGGCGACTACTGGCCAGGGGCTGCAGAAGATTTGATTTATCAGCTTCGCCAAGAGGAAGATGGCAGAAAACAAAATAAGAAAGGAACAACAAAAAAAACTATAACAAAAAGGGCTTTAAAAGCCTCTGGTCAGTCTGATCTTTCTGGAAATGCCTCGAAAGATCTACTCCTAATGCATAAACTTGGTGAAACCATTTGCCCGATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGCGTGCAGTCACTGTTGTATTTTAATGGTGTCTGGCAACCGTTGGGTTTGCAACCAGTGCAAGAATTTTCAGATTTGCGATAAGTGTTATGAAGCAGAACAAAAGCGTGAAGAAAGAGAAAGCCATCCTATTAATCAGAGGGAAAAACATACCCTTTACCGAATTGAAATTACTGATGTACCAGCTGATACAAAGGACAAAGATGAGATTCTTGAGAGTGAATTTTTTGACACTAGACAGGCATTTTTGAGTCTCTGTCAGGGAAATCATTATCAGTATGATACTCTAAGGCGGGCCAAACATTCTTCAATGATGGTCCTCTATCATCTTCATAATCCAACTGCTCCTGCTTTTGTGACAACTTGTAATATATGTCATCTTGACATAGAGACTGGTCAAGGTTGGCGTTGCGAAGTTTGCCCTGATTATGATGTATGCAATGCTTGTTATCAAAAGGATGGAGGCATTGATCATCCTCATAAGTTGACAAATCATCCATCAATGGCTGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGCTTCGAGTATTGCAGCTACGGAAAATGCTTGATCTTCTTGTGCATGCATCCCAATGTCGTTCTGCGCATTGCCAGTATCCAAACTGTCGCAAAGTGAAGGGGCTTTTCCGTCATGGGATACAATGCAAAACACGTGCCTCAGGAGGCTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTTCAACTTCATGCTCGTGCTTGCAAAGAATCCGAGTGCCATGTTCCACGATGCAGAGATTTAAAAGAACATTTAAAGAGGTTGCAGCAGCAATCTGATTCCCGGCGAAGAGCGGCTGTGATGGAGATGATGAGACAGAGAGCTGCAGAAGTTGCTAACAATGCATGA 5136 0.4272 MKLQAHITGQLSGQVPNQAGSQLPGLTQPNGNALPPQMPSLGGVPRSTINMDPEFHTVRSFMQDKIYHILLQRHQQPAPEGHRRKFKDLAKRLEEAMLKAAHSKEDYMNLDTLESRLFNCIRRSSMNSQNQQYPQVVSSSPIGTMIPTPGMSSVVNSSMVVASSVDASMIAANGCNSLASTSMNSGSIFVTGGLHGNSLSRSDGFSNGYQQSSTSFSIGSGGNMSSMGVQRIAGQMIPTPGFNGGSNHSYMNVETSNNSGAFSSVESTMVPQPQQQKQHVGGQNSHVLQSLGSQMDSGLRSGLQQKSFAYSNGAISGGLGLNGNNMQLANEPGTSDGYATTYSNSPKHLEQHFDQNQQPPMQGDGYGLSNVDSLGSGNFYASATCGSMMNTQNLNSVKLPAIPKTSSLRSSQSNLHSMQQGVHLKSQAINQLEKLNFQSSLTSRDGLLHPQQQYQQRPQQFQQPDQYAQQQFQLKLQSQQPQHLVSGDAFSQSLLSSNLESQVKSEPGVENHKEVLNSLVSEQFHISEMQNQFQQNSTEDISRGAQLLSFPTGQNDLSLSVSQNSQQKLHPHQLISESENNFSCLPIGAQSKSALLSQWNSQSRDGNNIVGNMSHEQHLHMDFHQRISRQDEAQCNNLSSDGSIVGQAVASRGSDEPLDSGGSIKKAHRNQQRWLLFLLHARRCPAPEGRCQERYCYSAQKLCRHIDGCKLPHCTYPRCHHTRLLLVHFRNCKDPGCPVCVFVRNYRRSFHLKPQIRPDPVVPSPRLIPKPLPMIETTEDLQPSIKRMKIEQCTQSFNPDNDNSAISVSVNCESLVSKDAQCQNYPHGEMTMAIKSELTEVKAEIPVQLVHGHLSEVNMSNADNRRPGGEPVTFDEPANSARQENFKTEKETRQDKPVSVTQPSENAVGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKAKAEKNQAMESLMSENSCQLCAVEKLTFEPPPIYCTTCGARIKRNAMYYTMGAGDTRHYFCIPCYNEARGDTIIADGTAIPKARLEKKRNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEIERGERKPLPQSAVLGAKDLPRTILSDQIEQRLFRRLKQERQERARLQGKSYDEVPGAEALVVRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSESQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAAKEKIVVDLTNLYDHFFVSTGECKAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETICPMKEDFIMVHLQHACSHCCILMVSGNRWVCNQCKNFQICDKCYEAEQKREERESHPINQREKHTLYRIEITDVPADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICHLDIETGQGWRCEVCPDYDVCNACYQKDGGIDHPHKLTNHPSMADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGIQCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLKRLQQQSDSRRRAAVMEMMRQRAAEVANNA 1711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0003 1711 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1031 1079 IPR013083 -
Glsi07g0003 1711 MobiDBLite consensus disorder prediction 882 896 - -
Glsi07g0003 1711 ProSitePatterns Zinc finger PHD-type signature. 1007 1078 IPR019786 -
Glsi07g0003 1711 SUPERFAMILY TAZ domain 668 747 IPR035898 -
Glsi07g0003 1711 Gene3D - 1410 1467 IPR043145 -
Glsi07g0003 1711 Pfam Histone acetylation protein 1136 1359 IPR013178 GO:0004402|GO:0006355|GO:0016573
Glsi07g0003 1711 SMART KAT11_2 1129 1426 IPR013178 GO:0004402|GO:0006355|GO:0016573
Glsi07g0003 1711 FunFam Histone acetyltransferase HAC1-like protein 1591 1708 - -
Glsi07g0003 1711 Coils Coil 1674 1694 - -
Glsi07g0003 1711 MobiDBLite consensus disorder prediction 859 915 - -
Glsi07g0003 1711 SUPERFAMILY TAZ domain 1596 1679 IPR035898 -
Glsi07g0003 1711 MobiDBLite consensus disorder prediction 1 34 - -
Glsi07g0003 1711 FunFam Histone acetyltransferase of the CBP family 12 1410 1469 - -
Glsi07g0003 1711 PANTHER CBP/P300-RELATED 86 1703 IPR013178 GO:0004402|GO:0006355|GO:0016573
Glsi07g0003 1711 ProSitePatterns Zinc finger ZZ-type signature. 1539 1566 IPR000433 GO:0008270
Glsi07g0003 1711 Pfam TAZ zinc finger 672 740 IPR000197 -
Glsi07g0003 1711 Pfam TAZ zinc finger 1604 1674 IPR000197 -
Glsi07g0003 1711 SUPERFAMILY FYVE/PHD zinc finger 1039 1080 IPR011011 -
Glsi07g0003 1711 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1096 1532 IPR031162 GO:0004402
Glsi07g0003 1711 ProSiteProfiles Zinc finger TAZ-type profile. 662 743 IPR000197 -
Glsi07g0003 1711 SUPERFAMILY RING/U-box 1394 1466 - -
Glsi07g0003 1711 ProSiteProfiles Zinc finger ZZ-type profile. 1534 1587 IPR000433 GO:0008270
Glsi07g0003 1711 SMART PHD_3 980 1079 IPR001965 -
Glsi07g0003 1711 Gene3D TAZ domain 1591 1708 IPR035898 -
Glsi07g0003 1711 Pfam Zinc finger, ZZ type 1536 1575 IPR000433 GO:0008270
Glsi07g0003 1711 ProSiteProfiles Zinc finger TAZ-type profile. 1594 1677 IPR000197 -
Glsi07g0003 1711 ProSiteProfiles Zinc finger ZZ-type profile. 1414 1477 IPR000433 GO:0008270
Glsi07g0003 1711 Gene3D TAZ domain 662 748 IPR035898 -
Glsi07g0003 1711 SMART TAZ_2 665 743 IPR000197 -
Glsi07g0003 1711 SMART TAZ_2 1597 1675 IPR000197 -
Glsi07g0003 1711 FunFam Histone acetyltransferase HAC1 1533 1584 - -
Glsi07g0003 1711 CDD PHD_HAC_like 1006 1078 - -
Glsi07g0003 1711 Gene3D - 1533 1585 IPR043145 -
Glsi07g0003 1711 SUPERFAMILY RING/U-box 1515 1583 - -
Glsi07g0003 1711 Pfam PHD-finger 1037 1079 IPR019787 -
Glsi07g0003 1711 Coils Coil 1112 1132 - -
Glsi07g0003 1711 SMART zz_5 1533 1579 IPR000433 GO:0008270
Glsi07g0003 1711 SMART zz_5 1413 1457 IPR000433 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0003 Glsi-ChrGlsi07 39499 52524 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Glsi07g0003 HAT_KAT11 1.7e-31 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0003 07 39499 52524 Glsi07g0003 07 39499 52524 ECH