Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi07g0001 | ATGAAACTACAGGCGCACGTTCCTGGACAAATGTCAGGGCAGGTACCTAATCAAGCAGGGTCTCAGTTGCCTGGACTGACTCAACCGAATAATGCCCTTCCTCCTCAGATGCCAAATTTAAGTGGTGTTCCACGTTCAACCATTAATATGGACCCTGAATTTCTTAGAGCACGCTTGTCTATGCAAGAGAAGATCTATGAAATACTATTGCAGCGGCAACAGCAGCCAGCTATGGAAGTACATAGAAGGTTTAAGGATCTTGCTAAACGCTTGGAGGAGGCCATGTTAAAAGCTGCAGTCTCTAAGGAGGACTACTTGAATGTAAATACATTAGAGAGTCGTTTGTTTAGTTGCATCAAACGATCATCTACAAATAATCATAACCAACAATATCCACAGCTTGTCAACTCTTCACCAATTGGTACAATGATACCAACCCCTGGTATGTCACATGCTGTGAATTCAAGCATGGTTGCATCTTCTGTAGATCCCTCAATGATTGCTGCCAGTGGATGTAATAGCTCAGCGCCTACATCTCTAAATAGTGAAAGCATGTTTGTAACTGGTGGCTTGCATGGCAATTCCCTAAGTAGATCTGATGGTTTCTCTAATGGCTATCAGCAGTCTTCTACCAGCTTTTCCATTGGTTCTGGGGGAAACATGTCCTCAATAGGTGTGCAGAGAATTGCAAGCCAGATGATTCCCACTCCTGGATTTAGTGGCAGCAGTAATTCCTCGTACATGAATGTAGAATCTTCTAATAATAGCAGTGTCTTTTCCAGTGTTGAATCTACGATGGTATCTCAGCCGCAGCAGCTGAAGCAGCATGTAGGCGGCCAAAACAGTCATGTATTGCAGAACCTTGGCAGCCAAATGGGTGGTGGATTAAGATCTGGCTTACCACAAAAATCTTTTGCATACTCAAATGGAGCTATGAGTAGTGGGTTAGGCTTGATAGGAAACAATATGCAACTTGCAAATGAACCTGGCACTTCTGATGGCTATGCTGCAACTTATGCTAATTCCCCTATACATTTACAACAGCACTTTGATCAAAATCAGCAACCAACAGTACAGAGTGATGGATATGGATTGACTACTGTTGACTCATTTGCTTTTGGAAACTTTTACACGTCTGCAACATCATCTGGATCTATGATGAACACTCAGAACTTAAATTCAGTAAAATTACCTCCAATGCCCAAAACCAGCTCTCTGATTAGTAGTCAGTCGAGTTTGCATGGTATGCAGCAGGGTGCTCATTTAAAGTCTCAAGCAATTAATCAGTTTGAAAAGTTGAATTTTCAGTCTTCTTTGACTTCAAGAGATGGCCTTCTGCATCCTCAACAGCAATATCAGCAACGGCCCCAACAATTTCAACAGCCGGAGCAGTCTGCTCAACAGCAATTTCAACTTAAGCTGCGAAGTCAGCAGCCTGAACATGTGATCAATAGTGATACTTTCAGTCAGTCTCATCTCTCTTCCAATCTAGACAGCCAAGTGAAGTCTGAGCCTGGAGTCGAAGACCATAAAGAAGTGCTCAATTCTCAGGTTTCTGAACAGTTTCATATTTCTGAGATGCAAAACCAGTTCCAACAGAACTCTACCGAAGGTTGCTGTAGGGGTGCTCAACATCCTTCTCTCCCAACTGATCAGAATGATTCATCCTCAGCACCTCAAAATTCGCAACAAATGTTGCCCCACCATCAATTGGTTTCAGAGTCTGAAAAAAATTTTAGCTGTCTTTCAGTTGGGGCACAATCTAAATCAGCACATCTGAATGAATGGAATTCTCAGTCACAGGATTGTAACCACATACCTGGGAATATGTCATATGAGCAACATTTCCACATGGATTTCCATCAGAGAATATCAAGGCAAGATGAAGCTCAATGTAATAATTTATCATCAGATGGATCTATTCTTCGTCAAGCTGTTGCTTCTGGAGGCTCAGCTGAGCCGCTAGACTCAGGCAGTTCTATCAAGAAAGCGCACAGGAACCAACAGAAGTGGCTTTTGTTTTTGCTTCATGCTCGACGGTGTCCTGCACCTGAAGGACAATGCCAAGCGCAATATTGTTATAGTGCCCAGAAGTTATGTAGACACATAGATGGATGCAAGCTGCCTCATTGTCCATATCCCCGCTGTCATCATACCAGGCTATTGCTTCTTCATTTCAGAAACTGCAAGGATCCTTATTGCCCTGTTTGTGTTTTTGTTAGAAGTTATCGACGCACATTTCAACTGAAGCCTCAGATTCGGCCAGATCCTGATTCAGGTATGCCAATTGCAGTAAATGGATCCTGTAAATCAGACAATACTGTAGTTACATCACCTCGATTGATCCCAAAGGCTCTACCTGTGATTGAAACTACAGAAGACCTGCAGCCATCACTAAAACGCAAGAAACTTGAGCATTGTACCCAGTCCTGTAATGCCGAGAATGACAACTCTGCTATATCAATTTCTGCAAAATGTGAAGCTCGTGTTTCCATGGATGTCCAGTGCCAAGACTATTCCCATGGTGAGACAACCGTTTCAATTAAATCTGAGCTTACAGAAGTTAAGGCAGAAGTTCCAGTGCATTTGGTACACGAAAATCTTAGTGATGTGAAAATGGGTAATGCGGATGACAGAAGGCCTGGTGAACCTGTCACATATGATGGGCCTGCTAATTTAGCTGGGCCAGAAAATATTAAAACTGAGAAAGAAACTGGACAAGATGAGCCAGAAAATTTGACCCAGCCATCTGAAAATGCAGTGGGAACCAAGTCTGGTAAGCCCAAAATAAAGGGGGTCTCCTTGACTGAACTATTCACTCCAGAGCAAGTCAGGGAACATATTACTGGCCTCAGGCAATGGGTTGGCCAAAGCAAAGCAAAAGCAGAAAAGAATCAAGCAATGGAGCATTCTATGAGTGAGAACTCCTGTCAGTTGTGTGCGGTAGAGAAGCTTACCTTTGAACCACCACCTATTTATTGCACTACTTGTGGTGCTCGGATTAAACGAAATGCTATGTATTATACCATGGGTGCTGGTGACACACGGCATTATTTTTGTATTCCATGCTATAATGAAGCGCGTGGGGACACCATTGTTGCTGATGGGACTGCCATTCCTAAGGCGAGGCTGGAAAAAAAGAGAAATGATGAGGAAACTGAGGAATGGTGGGTTCAGTGTGATAAATGTGAAGCTTGGCAACATCAAATTTGTGCCTTATTTAATGGTCGAAGAAATGATGGGGGACAAGCTGAATACACCTGCCCTAACTGCTATATTCAAGAGATAGAAAGAGGAGAGCGCAAACCCTTACCCCAAAGTGCTGTTCTTGGAGCCAAGGATTTGCCAAGAACTATTCTCAGTGACCACATAGAGCAACGGTTGTTTAGGCAACTAAAGCAAGAAAGGCAAGAGAGGTCAAGGCTTCAAGGAAAAAGTTATGATGAGGTGCCTGGGGCTGAAGCACTTGTGGTAAGAGTTGTGTCATCTGTAGACAAGAAGCTAGAAGTGAAACAGCGATTTTTGGAAATTTTTCAGGAAGAAAATTACCCAACAGAATTCCCATATAAATCGAAGGTAGTTTTGTTGTTTCAGAAGATTGAAGGCGTGGAGGTATGCCTGTTTGGCATGTATGTTCAAGAATTTGGATCTGAAAGTCAATTTCCTAATCAGCGTCGGGTGTATCTTTCATATCTTGACTCTGTGAAGTATTTTAGGCCTGAGGTTAAGGCAGTGACTGGGGAGGCTCTACGAACATTTGTTTATCATGAAATTCTGATTGGATACCTCGAATATTGCAAGAAACGTGGTTTTACAAGCTGCTATATATGGGCCTGTCCCCCATTGAAGGGTGAAGATTATATTTTATATTGTCATCCAGAGATTCAGAAAACTCCTAAATCTGATAAGCTTCGGGAATGGTACCTATCAATGTTAAAAAAAGCTACCAAGGAGAAAATTGTGGTTGATCTCACCAACTTATACGACCATTTCTTTGTATCCACTGGTGAATGTAGGGCTAAGGTTACAGCAGCAAGACTTCCATATTTTGATGGCGACTACTGGCCAGGGGCTGCAGAGGATTTGATTTATCAGCTTCGCCAAGAGGAAGATGGCAGAAAACAAAGTAAAAAAGGAACAACTAAAAAAACTATAACAAAAAGGGCTTTAAAAGCATCTGGTCAGTCCGATCTTTCTGGAAATGCCTCAAAAGATCTTCTCCTGATGCATAAACTCGGTGAAACCATTTCCCCCATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGCATGCAGTCACTGTTGTATTTTAATGGTATCTGGCAACCGTTGGCATTGCAACCAGTGCAAGAATTTTCAGATTTGTGATAAGTGTTACGAAGCAGAACAAAAGCGGGAAGAAAGAGAAAGGCATCCTCTTAATCAGAGGGAGAAACATATCCTTTACCCAGATGAAATTAATGCTGTACCTGAAGATACAAAGGACAAAGACGAGATTCTTGAGAGTGAATTTTTTGACACTAGGCAGGCATTTCTGAGTCTTTGTCAGGGAAATCATTATCAGTATGATACTCTAAGGCGGGCTAAGCATTCCTCGATGATGGTCCTCTATCATCTTCATAATCCAACTGCACCTGCCTTTGTGACAACTTGTAATATATGCCATCTTGACATAGAAACTGGTCAAGGTTGGCGTTGTGAAGTTTGCCCAGATTATGATGTATGCAATGCCTGTTTTCAAAAGGATGGTGGCATTGATCATCCTCATAAGCTGACAAATCATCCATCAATGGCTGATCGCGATGCTCAGAACAAAGAAGCAAGGCAGCTTCGAGTAATGCAGCTACGGAAAATGCTTGATCTTCTTGTGCATGCATCCCAATGTCGTTCCGTGCATTGCCAGTATCCAAATTGTCGCAAAGTGAAGGGGCTTTTCCGCCATGGGATACAATGCAAAACACGTGCCTCTGGAGGCTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTTCAACTTCATGCTCGGGCTTGCAAAGAATCTGAGTGCCACGTACCTCGGTGCAGAGATTTAAAAGAACATTTAAGGAGGTTGCAGCAGCAATCTGACTCTCGGCGAAGAGCTGCTGTGATGGAGATGATGAGACAGAGAGCGGCTGAAGTTGCCAACAATGCAGGATGA | 5178 | 0.427 | MKLQAHVPGQMSGQVPNQAGSQLPGLTQPNNALPPQMPNLSGVPRSTINMDPEFLRARLSMQEKIYEILLQRQQQPAMEVHRRFKDLAKRLEEAMLKAAVSKEDYLNVNTLESRLFSCIKRSSTNNHNQQYPQLVNSSPIGTMIPTPGMSHAVNSSMVASSVDPSMIAASGCNSSAPTSLNSESMFVTGGLHGNSLSRSDGFSNGYQQSSTSFSIGSGGNMSSIGVQRIASQMIPTPGFSGSSNSSYMNVESSNNSSVFSSVESTMVSQPQQLKQHVGGQNSHVLQNLGSQMGGGLRSGLPQKSFAYSNGAMSSGLGLIGNNMQLANEPGTSDGYAATYANSPIHLQQHFDQNQQPTVQSDGYGLTTVDSFAFGNFYTSATSSGSMMNTQNLNSVKLPPMPKTSSLISSQSSLHGMQQGAHLKSQAINQFEKLNFQSSLTSRDGLLHPQQQYQQRPQQFQQPEQSAQQQFQLKLRSQQPEHVINSDTFSQSHLSSNLDSQVKSEPGVEDHKEVLNSQVSEQFHISEMQNQFQQNSTEGCCRGAQHPSLPTDQNDSSSAPQNSQQMLPHHQLVSESEKNFSCLSVGAQSKSAHLNEWNSQSQDCNHIPGNMSYEQHFHMDFHQRISRQDEAQCNNLSSDGSILRQAVASGGSAEPLDSGSSIKKAHRNQQKWLLFLLHARRCPAPEGQCQAQYCYSAQKLCRHIDGCKLPHCPYPRCHHTRLLLLHFRNCKDPYCPVCVFVRSYRRTFQLKPQIRPDPDSGMPIAVNGSCKSDNTVVTSPRLIPKALPVIETTEDLQPSLKRKKLEHCTQSCNAENDNSAISISAKCEARVSMDVQCQDYSHGETTVSIKSELTEVKAEVPVHLVHENLSDVKMGNADDRRPGEPVTYDGPANLAGPENIKTEKETGQDEPENLTQPSENAVGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKAKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGARIKRNAMYYTMGAGDTRHYFCIPCYNEARGDTIVADGTAIPKARLEKKRNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEIERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFRQLKQERQERSRLQGKSYDEVPGAEALVVRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSESQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLKKATKEKIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQSKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACSHCCILMVSGNRWHCNQCKNFQICDKCYEAEQKREERERHPLNQREKHILYPDEINAVPEDTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICHLDIETGQGWRCEVCPDYDVCNACFQKDGGIDHPHKLTNHPSMADRDAQNKEARQLRVMQLRKMLDLLVHASQCRSVHCQYPNCRKVKGLFRHGIQCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG | 1725 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi07g0001 | 1725 | ProSiteProfiles | Zinc finger TAZ-type profile. | 659 | 740 | IPR000197 | - | |
| Glsi07g0001 | 1725 | MobiDBLite | consensus disorder prediction | 10 | 32 | - | - | |
| Glsi07g0001 | 1725 | MobiDBLite | consensus disorder prediction | 399 | 420 | - | - | |
| Glsi07g0001 | 1725 | Gene3D | - | 1423 | 1479 | IPR043145 | - | |
| Glsi07g0001 | 1725 | MobiDBLite | consensus disorder prediction | 449 | 511 | - | - | |
| Glsi07g0001 | 1725 | Pfam | TAZ zinc finger | 669 | 737 | IPR000197 | - | |
| Glsi07g0001 | 1725 | Pfam | TAZ zinc finger | 1617 | 1687 | IPR000197 | - | |
| Glsi07g0001 | 1725 | SMART | KAT11_2 | 1142 | 1439 | IPR013178 | GO:0004402|GO:0006355|GO:0016573 | |
| Glsi07g0001 | 1725 | Pfam | PHD-finger | 1050 | 1092 | IPR019787 | - | |
| Glsi07g0001 | 1725 | MobiDBLite | consensus disorder prediction | 533 | 568 | - | - | |
| Glsi07g0001 | 1725 | ProSitePatterns | Zinc finger PHD-type signature. | 1020 | 1091 | IPR019786 | - | |
| Glsi07g0001 | 1725 | MobiDBLite | consensus disorder prediction | 449 | 502 | - | - | |
| Glsi07g0001 | 1725 | FunFam | Histone acetyltransferase of the CBP family 12 | 1423 | 1482 | - | - | |
| Glsi07g0001 | 1725 | PANTHER | CBP/P300-RELATED | 84 | 471 | IPR013178 | GO:0004402|GO:0006355|GO:0016573 | |
| Glsi07g0001 | 1725 | SUPERFAMILY | FYVE/PHD zinc finger | 1052 | 1093 | IPR011011 | - | |
| Glsi07g0001 | 1725 | Pfam | Zinc finger, ZZ type | 1430 | 1465 | IPR000433 | GO:0008270 | |
| Glsi07g0001 | 1725 | Pfam | Zinc finger, ZZ type | 1549 | 1588 | IPR000433 | GO:0008270 | |
| Glsi07g0001 | 1725 | ProSiteProfiles | Zinc finger TAZ-type profile. | 1606 | 1690 | IPR000197 | - | |
| Glsi07g0001 | 1725 | Pfam | Histone acetylation protein | 1149 | 1372 | IPR013178 | GO:0004402|GO:0006355|GO:0016573 | |
| Glsi07g0001 | 1725 | Gene3D | TAZ domain | 1604 | 1721 | IPR035898 | - | |
| Glsi07g0001 | 1725 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1044 | 1092 | IPR013083 | - | |
| Glsi07g0001 | 1725 | SUPERFAMILY | TAZ domain | 1609 | 1692 | IPR035898 | - | |
| Glsi07g0001 | 1725 | MobiDBLite | consensus disorder prediction | 872 | 928 | - | - | |
| Glsi07g0001 | 1725 | SUPERFAMILY | RING/U-box | 1407 | 1486 | - | - | |
| Glsi07g0001 | 1725 | MobiDBLite | consensus disorder prediction | 1373 | 1397 | - | - | |
| Glsi07g0001 | 1725 | SUPERFAMILY | TAZ domain | 665 | 744 | IPR035898 | - | |
| Glsi07g0001 | 1725 | Coils | Coil | 1710 | 1725 | - | - | |
| Glsi07g0001 | 1725 | SUPERFAMILY | RING/U-box | 1528 | 1596 | - | - | |
| Glsi07g0001 | 1725 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
| Glsi07g0001 | 1725 | FunFam | Histone acetyltransferase HAC1 | 1546 | 1597 | - | - | |
| Glsi07g0001 | 1725 | ProSitePatterns | Zinc finger ZZ-type signature. | 1552 | 1579 | IPR000433 | GO:0008270 | |
| Glsi07g0001 | 1725 | ProSiteProfiles | Zinc finger ZZ-type profile. | 1547 | 1600 | IPR000433 | GO:0008270 | |
| Glsi07g0001 | 1725 | ProSiteProfiles | CBP/p300-type histone acetyltransferase (HAT) domain profile. | 1109 | 1545 | IPR031162 | GO:0004402 | |
| Glsi07g0001 | 1725 | SMART | TAZ_2 | 1610 | 1688 | IPR000197 | - | |
| Glsi07g0001 | 1725 | SMART | TAZ_2 | 662 | 740 | IPR000197 | - | |
| Glsi07g0001 | 1725 | Gene3D | TAZ domain | 658 | 757 | IPR035898 | - | |
| Glsi07g0001 | 1725 | ProSiteProfiles | Zinc finger ZZ-type profile. | 1427 | 1490 | IPR000433 | GO:0008270 | |
| Glsi07g0001 | 1725 | Gene3D | - | 1546 | 1598 | IPR043145 | - | |
| Glsi07g0001 | 1725 | Coils | Coil | 1125 | 1145 | - | - | |
| Glsi07g0001 | 1725 | SMART | zz_5 | 1546 | 1592 | IPR000433 | GO:0008270 | |
| Glsi07g0001 | 1725 | SMART | zz_5 | 1426 | 1470 | IPR000433 | GO:0008270 | |
| Glsi07g0001 | 1725 | FunFam | Histone acetyltransferase HAC1-like protein | 1604 | 1721 | - | - | |
| Glsi07g0001 | 1725 | CDD | PHD_HAC_like | 1019 | 1091 | - | - | |
| Glsi07g0001 | 1725 | SMART | PHD_3 | 993 | 1092 | IPR001965 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi07g0001 | Glsi-ChrGlsi07 | 13851 | 28032 | Proximal |
Transcription factors information