Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g2086 ATGGAAGGATTGGATGGGTTTATAGAGAGGCTTTTGGAAGCGAGGAGGAACAGAGGCAAACGGATTCAGCTGACGGAGTCAGAAATTCGGAACCTTTGCATCACAGCAAAAGAAGTCTTCCTCAACCAGCCTAACCTTCTCGAATTGGAAGCTCCCATCAACGTTTGTGGTGACATACACGGCCAATATCCAGACCTGTTGCGACTGTTCGAGTACGGTGGTTTTCCGCCCCAATCCAATTATCTATTCCTTGGGGACTATGTGGACAGAGGAAAACAGAGTGTTGAAACAATATGTCTCCTCCTTGCCTACAAGATCAAATTTCCGGAGAACTTTTTCCTTCTGCGAGGAAATCATGAATGCGCTTCAATCAACAGAATCTATGGATTCTATGACGAGTGCAAGCGGAGATTCAGTGTCCGTCTATGGAAGGTATTCACAGATTGTTTCAACTGTTTGCCTGTAGCTGCAGTGATTGATGACAAGATCATGTGCATGCATGGTGGGCTTTCCCCGGAGATGGAGAGCTTAAATCAGATCAAAGACATAGAAAGGCCAGTGGACGTGCCGGACCAGGGCCTCTTATGTGATCTCCTTTGGGCTGATCCAGACAGAGACATTAGAGGGTGGGGTGAGAATGACAGGGGTGTTTCCTACACTTTTGGACCAGACAAGGTAGCCGAGTTCTTGAGGAAACACGATCTCGATCTTATATGCCGGGCTCACCAGGTGGTTGAAGATGGTTTCGAATTCTTTGCAGACAGGCAACTAGTTACCATATTTTCAGCCCCAAACTATTGTGGAGAGTTCAACAATGCGGGAGCACTGATGTGCGTGGACGAAACTTTGCTCTGCTCCTTTCAGATACTCAAGCCCTGGAGAGGAAGAGCCCCACAACTGGAGTAG 906 0.4757 MEGLDGFIERLLEARRNRGKRIQLTESEIRNLCITAKEVFLNQPNLLELEAPINVCGDIHGQYPDLLRLFEYGGFPPQSNYLFLGDYVDRGKQSVETICLLLAYKIKFPENFFLLRGNHECASINRIYGFYDECKRRFSVRLWKVFTDCFNCLPVAAVIDDKIMCMHGGLSPEMESLNQIKDIERPVDVPDQGLLCDLLWADPDRDIRGWGENDRGVSYTFGPDKVAEFLRKHDLDLICRAHQVVEDGFEFFADRQLVTIFSAPNYCGEFNNAGALMCVDETLLCSFQILKPWRGRAPQLE 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g2086 301 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 8 294 - -
Glsi06g2086 301 SMART pp2a_7 24 294 IPR006186 GO:0016787
Glsi06g2086 301 ProSitePatterns Serine/threonine specific protein phosphatases signature. 115 120 IPR006186 GO:0016787
Glsi06g2086 301 Gene3D - 2 297 IPR029052 -
Glsi06g2086 301 SUPERFAMILY Metallo-dependent phosphatases 20 294 IPR029052 -
Glsi06g2086 301 FunFam Serine/threonine-protein phosphatase 2 294 - -
Glsi06g2086 301 CDD MPP_PP1_PPKL 4 292 - -
Glsi06g2086 301 PRINTS Serine/threonine phosphatase family signature 52 79 IPR006186 GO:0016787
Glsi06g2086 301 PRINTS Serine/threonine phosphatase family signature 148 174 IPR006186 GO:0016787
Glsi06g2086 301 PRINTS Serine/threonine phosphatase family signature 256 272 IPR006186 GO:0016787
Glsi06g2086 301 PRINTS Serine/threonine phosphatase family signature 177 204 IPR006186 GO:0016787
Glsi06g2086 301 PRINTS Serine/threonine phosphatase family signature 81 108 IPR006186 GO:0016787
Glsi06g2086 301 PRINTS Serine/threonine phosphatase family signature 114 138 IPR006186 GO:0016787
Glsi06g2086 301 PRINTS Serine/threonine phosphatase family signature 234 254 IPR006186 GO:0016787
Glsi06g2086 301 Pfam Calcineurin-like phosphoesterase 52 244 IPR004843 GO:0016787
Glsi06g2086 301 Pfam Serine-threonine protein phosphatase N-terminal domain 4 50 IPR031675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g2086 Glsi-ChrGlsi06 67980777 67981973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g2086 31 240 Calmodulin-binding Proteins AT5G63870 30.800 7.71e-32 118