Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g2079 ATGAAGGAGATGGGTTGGTCGGTGGCATTGGTATTGGTAAGCAGCTTGATAGTTATCATATGGGAGAAGCTTTGGTTGAGGCCCCGAAGGATTCGAGGGGTACTTGAGAAGCAAGCTATCAGAGGGGCAAGGCCTTGTTTTCCCTTTGGCAACGTTAAGGAGATGCAACGAATCCAATCCCAATCTGATTCTGGTGGTTCCAATTTGGGGTCAGAATACTCAGACCAATGGTTTTACTCTCTCTTCCCATATCTTCATAAATGGAGGCAACACTACGGTTCAATGTACGTGTACTCCACCGGAATGAGGCAGCATATGTATGTGGGCAATGCCGAATTCATCAGACACCTAAATCTGCGAAGGTCATTGGATCTTGGTAGGCCTTCCTATTTGGCCAAGCCATTGAAACCCATGTTGGGTGCAGGCATCCTCAGGGCTAATGGACAGCACTGGGCCTTCCAAAGGAATCTTATTGCTCCTGAATTTTTCCTTTCCAAGATTAAGAACATGGTGGATTTTATGGAAGAATCTACAAGGGCGATTGTGAGCACATGGGAGAGCCGTATAACCGAAAAGGAGGGAGGAATTGCGGAGATGGTAATTGACGAGGATATGAAGGTTCTCACTGCGGATGTCATTTCAAGAGCTTGTTTTGGCAGCTCTTACGCTCAAGGCAATCAAATTTTTGCAAAACTAGCTACCATGCAAGCCGCAATAGGAAAACCGAGTCTTCTTTTTGGACTTTTAAACTTCAGTTTTCTTCCCACCAAGGAAAACAGAGAGGTATGGAAATTGAAGAAAGAGATAGATGCGCTGATACTGAAAATGATCAATGATCGTGAGCTACAAAACCAAAAGAATCACGAGGACCTATTCCAAATAATACTGGAAAGTGCACGTGTCACCAACTTTGGTAATAATAGTGGGTGGGGAATAAAGCAGCTCACGCATAAACACGAAACCAACCGGCTGATTGTGGATATCTGCAAAAACATCTACTTTGCCGGCTCCGAGACCGGTGCTCTTGTAGCTACTTGGACATTAGTGCTACTGGCCATGCATCCTGACTGGCAACAACGTGTTCGATCCGAGGTTTTGGACACCTACGGCAATAATATGTTGCCTCACTGTTTCAATGACATGGACAAATTTCGAAAGTTGAAAGAACTGACAATGGTGATTCAAGAGAGCCTGCGTCTTTATGGGCCTGCAGTTATAACTTCAAGGGAAGCTTTGGATGAGATGAAGGTGGGGGAACTTGTGGTGCCAAAAGGCATCAACATGTGGATCTTCATTTCTGCGTTGCACCGTGACCCTGAGATTTGGGGACCAAACGCCAGTGAGTTCAAGCCAGAAAGGTTTGCTGGTGGGGTTTCTGAGGCCTGTAAGTATCCTCAAGCTTACATGCCATTTGGGTTTGGGAGTCGAATTTGCGTAGGCCAACACTTCGCCTTGGTAGAAGTCAAGATCATACTCTCTCTCCTTTTGTCCAACTTCTCCTTCTCTGTTTCCCCAAATTATCGTCATTGTCCTGTGTACAAAATGCTGCTGATGCCAAAATATGGAGCCAGGCTCCTTGTTAGCAAGTTTCTATACCAACAACGTAATAAAAGGGAGGTCCATCAACAACCAGTATTGTATCAGGCTGTTTTTGAATTGGAAAGTGGAAAAGCTGTCAACTGCAAAAGTCACAAAAACAACCCAAGCAAAGGGAAGCTGTGCTTCTACGCAGTTCCAGCGCCATCACAAGAGATTGCTCTTTCTTTCTCAACCTTGATCTGCCTCTCTTACTGGGGATCCCTGTGTCGCGTTGCTTGA 1818 0.4538 MKEMGWSVALVLVSSLIVIIWEKLWLRPRRIRGVLEKQAIRGARPCFPFGNVKEMQRIQSQSDSGGSNLGSEYSDQWFYSLFPYLHKWRQHYGSMYVYSTGMRQHMYVGNAEFIRHLNLRRSLDLGRPSYLAKPLKPMLGAGILRANGQHWAFQRNLIAPEFFLSKIKNMVDFMEESTRAIVSTWESRITEKEGGIAEMVIDEDMKVLTADVISRACFGSSYAQGNQIFAKLATMQAAIGKPSLLFGLLNFSFLPTKENREVWKLKKEIDALILKMINDRELQNQKNHEDLFQIILESARVTNFGNNSGWGIKQLTHKHETNRLIVDICKNIYFAGSETGALVATWTLVLLAMHPDWQQRVRSEVLDTYGNNMLPHCFNDMDKFRKLKELTMVIQESLRLYGPAVITSREALDEMKVGELVVPKGINMWIFISALHRDPEIWGPNASEFKPERFAGGVSEACKYPQAYMPFGFGSRICVGQHFALVEVKIILSLLLSNFSFSVSPNYRHCPVYKMLLMPKYGARLLVSKFLYQQRNKREVHQQPVLYQAVFELESGKAVNCKSHKNNPSKGKLCFYAVPAPSQEIALSFSTLICLSYWGSLCRVA 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g2079 605 Gene3D Cytochrome P450 28 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g2079 605 PANTHER CYTOCHROME P450 FAMILY MEMBER 19 523 - -
Glsi06g2079 605 SUPERFAMILY Cytochrome P450 78 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g2079 605 PRINTS P450 superfamily signature 478 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g2079 605 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g2079 605 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g2079 605 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g2079 605 Pfam Cytochrome P450 83 526 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g2079 605 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Glsi06g2079 605 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g2079 605 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g2079 605 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g2079 605 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g2079 605 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g2079 605 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g2079 Glsi-ChrGlsi06 67956713 67963633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g2079 113 527 Cytochrome P450 AT5G24900 43.602 1.90e-123 369