Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g2069 ATGCGAACGGCTCTTGATGTCTTGTCAAAAGCCTTGAGGAGGATGGATAAAATATCTCTCCTTCACATCTTTTTATTATCATTTTCAACGTCACTTTCCGGAGGTTCCAAGCTCCGGCTTGGGGTTTCGCACGTTTTACTCATCTCAACTTCTCAAGTTAGTGGGATGTTGACTCTGAGATTACATGAATATGCCTTGGCTGTTTCCTTTTGTTGTTTCATTCTCACCGCAGCCACACAAAGAACAGATCCTTCGGAAGTGGATGCACTGAAAGAAATCAAGAAAAGTTTGATTGATCCCATGGACCATCTGAGGAATTGGAATAAGGGTGACCCATGTACATCAAACTGGACCGGGGTTCTGTGTTTTGATAGGATTGGGGCTGATGGATACCTACATATCCGTGAGCTCTACTTAATGACTTTGAATCTCTCGGGAAGTCTAGCACCTCAGCTTGGTCAGCTATCTAGTCTTCGGATAATGAATTTCATGTGGAATGATCTGACTGGCACTATACCTAAGGAGATTGGAAATATCACATCATTGAAACTTTTGCTTCTAGATGGAAATAAATTATCAGGTACTTTACCAGATGAGCTTGGCAATCTCTCAAATTTAAATAGGTTCCAAGTCAACGAAAACCAATTCTCAGGTCCAATACCACAATCATTTGCCAACTTGATCAATGTTAGACACCTCCACCTGAACAACAACTCATTTAGTGGTCAAATTCCACCCAAGCTTTCTAAACTATCCAATCTTCTGCACTTGCTTGTGGACAGCAATGAATTATCTGGATCTCTTCCACCAGAATTCTCCATGTTACAGGAGTTACGCATACTAGATCTTAGCTGGAATCAACTTACTGGACCCATACCATCAAATAAGCTATCAAATAATATGACGAATATTGATCTCCGCAACAACTCATTTTCAGACATTTTGGGAAATCGAAATCCACCAGCAAATGTCACCTTGAGGCTTGCTGGCAATCCTATCTGCAAGAATTCAAGGATGCAAATTGGTGGTCAATACTGTGGACCTGAAGCGCATGAGGGAGTCGACAACTCTACGAATTCAAAAAATGTCTGTCCAGATCATGCTTGTCCAGTGGATAATTTCTATGAATATGTCCCAGCTTCCCCTGTTCCCTGCTTTTGTGCAGCACCTCTGAGAATTGGATACCGGCTGAAAAGCCCTAGTTTCTCTTACTTTCCTCCATATATAACTCCTTTTGAATATTATATAACTCATTCATTACACTTGGACCTCCATCAATTATCAATATATTCATATGCTTGGGAAGAGGGACCACGTCTTAGGATGTATTTGAAACTTTTTCCTATTTTCAATGATTCCCACTCTAATGTGTTCAATACAAGTGAGGTCAATCGTATTAAAGACATATTTACATCATGGGATTTTCCTCGCACTGATTTTTTTGGACCATATGAACTCCTGAACTTCACTCTTCAGGGACCTTATGCAAATATAATTACGGAGTCAGAGAGCAGTAAAACCAGTACAGGCATATTAGTAGTTTCTATAGTTGCGGCTGTTGCTTGTGTTGTAGCAATATCTGCAATAGTCACTCTTGTGATTGCTAGAAGACATGTCAGATACCACCACAAGATATCAAGAAAACATGGGTCCTCTACTATTTCTATGAAAATAGATGGTGTGAAAGCATTCTCTTTTAGAGAACTGGCGCTTGCAACTGGCAATTTTAGCAGCTCCACTCAAGTGGGGCAAGGAGCTTATTTGTCTTCTTTGTGCTGTTTAAGCCAATTGTTGGTTCTTTGTGTTGATCTGGTTGAGCATGTCTGTTCTGTTCAGTCCACTTGTGAGATGGATTTATCACTAATCCTGGTTTATGAATTCATGCCTAATGGAACCTTGCGTGAGTGGATTTCTGGTAAAAGGAAGGGAAACCTAAATTTTGGTATGAGGATGCGGATTGCAATGGGTACAGCCAAAGGCATTCTCTATCTCCATACTGAGGCTAACCCTCCTATATTCCACAGAGATATTAAAGCCAGTAACATACTTCTGGACTCCAAGCTTATTGCTAAAGTGGCTGATTTTGGACTTTCACGGCTTGCACCATACATTGACGATGAAGGGACCGCTCCTAAATATGTGTCAACAGTTGTGAGGGGAACACCAGGTTACCTGGATCCAGAGTACTTCTTGACTCATAAGTTGACAGACAAAAGCGATGTCTATAGCCTGGGAATTGTGTTTCTGGAGCTTTTGACAGCCATGCAACCAATATCACATGGGAAAAACATTGTCCGCGAGGTTAATGTAGCTTGGCAGTCTGGGAAGATACTTTCCATTATAGATAGCAGAATGGATTACTTTCCATCTGATTGCGTTGAGAGGTTCTTAACTCTCGCCCTCAGTTGTTGCCATGAGAATCAAGAGGAGCGGCCATCAATGGTAGATGTGGTCAGGGAGTTGGAAATTATTCTTGCAATGTTGCCAGAAACTGAATTTACTTTCTCAGATACTACTTCTGATTATTCTAGTAAACTGGCACCATCATCATCGGCATCATACATGACAGGGGACCACCAAAACATATCCTCAACTCTGTTGGGAAGCGATCTTATCAGTGATGTCATTCCGACCATTGTTCCGCGTTGA 2649 0.4126 MRTALDVLSKALRRMDKISLLHIFLLSFSTSLSGGSKLRLGVSHVLLISTSQVSGMLTLRLHEYALAVSFCCFILTAATQRTDPSEVDALKEIKKSLIDPMDHLRNWNKGDPCTSNWTGVLCFDRIGADGYLHIRELYLMTLNLSGSLAPQLGQLSSLRIMNFMWNDLTGTIPKEIGNITSLKLLLLDGNKLSGTLPDELGNLSNLNRFQVNENQFSGPIPQSFANLINVRHLHLNNNSFSGQIPPKLSKLSNLLHLLVDSNELSGSLPPEFSMLQELRILDLSWNQLTGPIPSNKLSNNMTNIDLRNNSFSDILGNRNPPANVTLRLAGNPICKNSRMQIGGQYCGPEAHEGVDNSTNSKNVCPDHACPVDNFYEYVPASPVPCFCAAPLRIGYRLKSPSFSYFPPYITPFEYYITHSLHLDLHQLSIYSYAWEEGPRLRMYLKLFPIFNDSHSNVFNTSEVNRIKDIFTSWDFPRTDFFGPYELLNFTLQGPYANIITESESSKTSTGILVVSIVAAVACVVAISAIVTLVIARRHVRYHHKISRKHGSSTISMKIDGVKAFSFRELALATGNFSSSTQVGQGAYLSSLCCLSQLLVLCVDLVEHVCSVQSTCEMDLSLILVYEFMPNGTLREWISGKRKGNLNFGMRMRIAMGTAKGILYLHTEANPPIFHRDIKASNILLDSKLIAKVADFGLSRLAPYIDDEGTAPKYVSTVVRGTPGYLDPEYFLTHKLTDKSDVYSLGIVFLELLTAMQPISHGKNIVREVNVAWQSGKILSIIDSRMDYFPSDCVERFLTLALSCCHENQEERPSMVDVVRELEIILAMLPETEFTFSDTTSDYSSKLAPSSSASYMTGDHQNISSTLLGSDLISDVIPTIVPR 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g2069 882 Gene3D Transferase(Phosphotransferase) domain 1 628 839 - -
Glsi06g2069 882 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 84 245 - -
Glsi06g2069 882 SUPERFAMILY Protein kinase-like (PK-like) 562 848 IPR011009 -
Glsi06g2069 882 PANTHER RECEPTOR-LIKE PROTEIN 55 93 826 - -
Glsi06g2069 882 ProSiteProfiles Protein kinase domain profile. 484 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g2069 882 Pfam Leucine rich repeat N-terminal domain 84 122 IPR013210 -
Glsi06g2069 882 Gene3D Ribonuclease Inhibitor 83 244 IPR032675 -
Glsi06g2069 882 SMART serkin_6 576 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g2069 882 SUPERFAMILY L domain-like 82 336 - -
Glsi06g2069 882 Gene3D Ribonuclease Inhibitor 245 359 IPR032675 -
Glsi06g2069 882 Pfam Protein kinase domain 606 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g2069 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 672 684 IPR008271 GO:0004672|GO:0006468
Glsi06g2069 882 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 628 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g2069 Glsi-ChrGlsi06 67892178 67907302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g2069 60 832 Receptor kinase-like Gene Family AT5G01950 51.165 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Glsi06g2069 Pkinase 7e-33 CL0016