Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g2062 ATGAGGAACATCAATGGGTGTGTTCGGTTCTTTCTTTACTTGTTCTTAGCTATTCAACTTGTTCGAGCTGCGGATTATGTGCCCTCCGACAAACTACTCTTGAGCTGTGGGGGGCCTCCTTATTCAACTGATACCGATGGCCGGAAGTGGACCACTGATATTGGGTCCAAGTTTACATCTTTAGCAGGAAAATCCTCAACTTCACCTGCAGCAACTCAAAACCCGGCGGTCCCTGACGTTCCATACATGACTGCTCGGGTATTTCACTCAGAATTCACCTACAGTTTTCCGGTGGCCTCAGGTCGGAAGTTTCTTCGTCTCTACTTTTATCCATCTTCCTATGCTGGTCTCAACGCGTCCAATGCTCTCTTCTCTGTTACTACTCAGTCCTACACCCTTCTTAGGAACTTCAGTGTTGCTCAAACCACATCTGCTTTGAATTATGACTTCATTATAAAGGAATACTTGATCAATGTTGAAGGGGAAAAGTTGAATGTGACTTTCACTCCGTCTGCCAAAGCTTCAAATGCATTTGCATTTGTTAACGGTATTGAGATTGTGTCCTTGCCTGATATTTATAGTTCTACTGATGGAAATACCTTGACTGTGGGTACAGATACTTCTCCCAACATTGACAATAGCACTGCACTTGAGAATGTTTATAGGTTGAATGTTGGTGGGAATGATATCTCCCCTTCCCAAGATACAGGTTTGTTCAGGTCATGGTCTGGGGACACTCTTTACCTCTATGGTGCTGCATATGGAGTTACAGAGCCTGCTGATCCGGAAGTTAAAATTAACTTTCCTCCAGACACACCCACTTATATTGCTCCAGTTGATGTCTACTCTACAGCTAGATCAATGGGTCCAGATGCCAACATCAATGTAAACTACAATTTGACTTGGATTTTCTCGATTGATTCCGGGTTTTCTTATCTTGTGAGGCTCCATTTTTGTGAGGCTACTACCAACGTAACCAAGATTAATCAAAGGGTGTTTGATATATTCCTCAATAATGAAACTGCTCAAGAAGGGGCCGATGTTATTGCCTGGGCGGGAGAATATGATCTCCCACAGGCAAATGGGGTTCCAGTACATAAGGATTTTGTTGTTTTTGTTCCTAATGGGCAACCACAGCAGGATTTGTGGCTTGCACTGCATCCAGATACTACTTCAAAGCCACAGCTTTATGATGCCATCTTGAATGGAGTAGAGATATTCAAGATTAATGATACTACTGGGAATCTTGCAGGGGCAAATCCTATTCCTGCTCCTCAGCAAGAAACCATTGACCCATTATCAGCTAGACTCTCCAGTCATGGTAAATCAAAGAATCAGACAGGAATAGTCGCTGGAGGTGTTAGTGGAGGAGTTGGTTTAGCACTTGTTGTTGGACTCTTTGCTTTTGTTGCATCCCGGCGTCGTAGGCTTGGCAAGGATTCTAGTTCAAGTGAAGGGCCATCTGGGTGGCTTCCTCTTTCTCTCTATGGTAACTCACACTCTGCTGGTTCTGCCAAGACCAACACAACAGGAAGTTATGCATCCTCTCTCCCATCAAACCTTTGTCGTCATTTCTCATTCGCTGAAATCAAGGCTGCCACAAACAACTTTGATGAGGCTTTGGTCCTTGGTGTGGGAGGATTCGGTAAGGTTTACAAAGGAGAAATTGATGGCGGAACGACCGAAGTAGCAATCAAACGTGGGAACCCACTTTCTGAGCAGGGAGTACATGAGTTCCAAACTGAGATTGAAATGCTCTCTAAACTTCGCCATCGCCATCTTGTTTCACTGATAGGATACTGCGAAGAAAACTGTGAAATGATCCTTGTCTATGATTATATGGCTTATGGAACTCTCCGGGAGCATCTATACAAGACCCAGAAACCTCCACTGCCATGGAAGCAAAGGCTAGAGATATGCATTGGAGCTGCTCGAGGTTTACACTATCTACATACTGGTGCTAAGCACACTATCATCCACCGAGATGTGAAGACTACTAACATTTTACTTGATGAGAAGTGGGTGGCTAAGGTTTCTGATTTTGGATTGTCTAAAACAGGTCCTACATTGGATAACACACATGTGAGCACTGTAGTTAAGGGTAGTTTTGGTTACTTGGATCCAGAATACTTCAGAAGGCAGCAACTGACTGATAAATCTGATGTTTACTCCTTTGGAGTGGTTCTTTTTGAGATATTGTGTGCTCGCCCGGCTTTGAATCCAACCCTTCCTAAGGAGCAAGTGAGCTTAGCAGAATGGGCTGCTCATTCCCACAACAAAGGCATTCTTGACCAACTAGTTGATCCTTATCTGAAGGGTAAGATAGCACCAGAATGCTTCAAGAAGTTTGCCGAGACTGCCATGAAGTGTGTGGCTGATCAGGGCATTGAGAGGCCATCCATGGGTGATGTGTTGTGGAACCTTGAATTCGCTTTGCAGCTGCAGGAGAGTGCAGAGGAGAGTGGGGAGGGCATTGGTGGAATGCGCATTGAAGAGGAGCCATTGTATGTAAATTCTAAAGGGAAGGACCTTGATGCATTACCAGGTTTTGATGGTAATGTGACTGACTCAAGGAGCACAGGAATGAGTATGAGCATCGGTGGTAGAAGCTTAGCCAGTGAAGACTCCGATGGATTAACTCCTAGTACTGTGTTTTCACAGATCATGAATCCAAAAGGACGTTAA 2685 0.4439 MRNINGCVRFFLYLFLAIQLVRAADYVPSDKLLLSCGGPPYSTDTDGRKWTTDIGSKFTSLAGKSSTSPAATQNPAVPDVPYMTARVFHSEFTYSFPVASGRKFLRLYFYPSSYAGLNASNALFSVTTQSYTLLRNFSVAQTTSALNYDFIIKEYLINVEGEKLNVTFTPSAKASNAFAFVNGIEIVSLPDIYSSTDGNTLTVGTDTSPNIDNSTALENVYRLNVGGNDISPSQDTGLFRSWSGDTLYLYGAAYGVTEPADPEVKINFPPDTPTYIAPVDVYSTARSMGPDANINVNYNLTWIFSIDSGFSYLVRLHFCEATTNVTKINQRVFDIFLNNETAQEGADVIAWAGEYDLPQANGVPVHKDFVVFVPNGQPQQDLWLALHPDTTSKPQLYDAILNGVEIFKINDTTGNLAGANPIPAPQQETIDPLSARLSSHGKSKNQTGIVAGGVSGGVGLALVVGLFAFVASRRRRLGKDSSSSEGPSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALVLGVGGFGKVYKGEIDGGTTEVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHSHNKGILDQLVDPYLKGKIAPECFKKFAETAMKCVADQGIERPSMGDVLWNLEFALQLQESAEESGEGIGGMRIEEEPLYVNSKGKDLDALPGFDGNVTDSRSTGMSMSIGGRSLASEDSDGLTPSTVFSQIMNPKGR 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g2062 894 CDD STKc_IRAK 543 809 - -
Glsi06g2062 894 ProSitePatterns Protein kinases ATP-binding region signature. 543 566 IPR017441 GO:0005524
Glsi06g2062 894 Gene3D Phosphorylase Kinase; domain 1 522 613 - -
Glsi06g2062 894 FunFam FERONIA receptor-like kinase 31 190 - -
Glsi06g2062 894 Pfam Malectin-like domain 34 409 IPR024788 -
Glsi06g2062 894 FunFam FERONIA receptor-like kinase 215 410 - -
Glsi06g2062 894 Gene3D Transferase(Phosphotransferase) domain 1 614 825 - -
Glsi06g2062 894 SUPERFAMILY Protein kinase-like (PK-like) 512 810 IPR011009 -
Glsi06g2062 894 PANTHER OS03G0124300 PROTEIN-RELATED 11 479 IPR046957 GO:0004672
Glsi06g2062 894 FunFam Receptor-like protein kinase FERONIA 509 613 - -
Glsi06g2062 894 SMART serkin_6 537 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g2062 894 Pfam Protein tyrosine and serine/threonine kinase 542 805 IPR001245 GO:0004672|GO:0006468
Glsi06g2062 894 MobiDBLite consensus disorder prediction 855 894 - -
Glsi06g2062 894 FunFam Receptor-like protein kinase FERONIA 614 824 - -
Glsi06g2062 894 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Glsi06g2062 894 Gene3D - 32 189 - -
Glsi06g2062 894 Gene3D - 216 410 - -
Glsi06g2062 894 ProSiteProfiles Protein kinase domain profile. 537 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g2062 Glsi-ChrGlsi06 67837269 67839953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g2062 17 894 Receptor kinase-like Gene Family AT3G51550 74.263 0.0 1323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi06g2062 Malectin_like 5.3e-41 CL0202