Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g2053 ATGGAGAATTTGCCCTGGAATACATCAAAAGCAACGGAAGAGCTTGTGAGAGGGCGTGAGTTTGCGTACCAGCTTCGAAATATCTTCCAAAAATCCATTAATGGAGGACATGACGACGAAGATGATGGCGAAGCTGAAGATCTCGTAGGAAAAGTGCTGAGCTCATTCAGCAGTACCCTTTTGCTCTTGAACAAGAATAATTTCAGCAAGCATCAAGATCAATCCAACGACATCGTTTCCCAACAGCTGCATGCTCTCCCTGCTAAATCTGAGGAATCTCAAGAGAGTTGCAAGAGCTCCGCCGTTAAAGATCGAAGAGGCTGCTATAAAAGAAGAAGAACTTCACATACATGGGAGAAGGACTCCGAAGCTCCAGCGGACGATGGGCATGCATGGAGAAAGTATGGCCAAAAAATTATACTGAATGCCAAATTCCCAAGGAACTACTTCAGATCTTTTGCAGAAGGTGCCAAGTCCAGTTGGAGACACACAGAAGAAGGTGGGACTCACACACTTGTTGGTCTCTCTCCAACTTCCATTGAGACCTCCAATATTTAG 558 0.4516 MENLPWNTSKATEELVRGREFAYQLRNIFQKSINGGHDDEDDGEAEDLVGKVLSSFSSTLLLLNKNNFSKHQDQSNDIVSQQLHALPAKSEESQESCKSSAVKDRRGCYKRRRTSHTWEKDSEAPADDGHAWRKYGQKIILNAKFPRNYFRSFAEGAKSSWRHTEEGGTHTLVGLSPTSIETSNI 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g2053 185 SMART WRKY_cls 126 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g2053 185 Pfam WRKY DNA -binding domain 127 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g2053 185 ProSiteProfiles WRKY domain profile. 121 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g2053 185 MobiDBLite consensus disorder prediction 85 104 - -
Glsi06g2053 185 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 151 IPR044810 GO:0003700
Glsi06g2053 185 SUPERFAMILY WRKY DNA-binding domain 123 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi06g2053 185 Gene3D WRKY domain 108 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g2053 Glsi-ChrGlsi06 67789840 67791356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g2053 10 160 WRKY Transcription Factor Family AT3G56400 34.395 3.84e-18 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi06g2053 WRKY 1.3e-09 CL0274