Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g2033 ATGATTGCCAAGAACTACTACGAGTTTTCACGTGGAGCTGTTGTTGAAATGGCCTGGATAATGCTTAGTGTTGACTACTCAAGTTATATATACTCGTATCTATCGGTTCAATTAAAAATTGCTAGCCCGCTTTTCTGGGTTCAATTCTCTGCTATGTTGAAGGGGAGATTAGGAGGCATGGCTCATACTGGATACGCTGAAACCGACCCATCTGGTCGATATGGGCGTTTCAAAGATGTTCTGGGCAAAGGAGCCATGAAGACAGTGTATAGAGCATTTGATGAAGTGCTAGGAGTTGAAGTGGCTTGGAACCAAGTGAAGCTTGGAGACGTCTTTCACTCCCCAGAGGAACTCCAACGCCTTTATTCAGAGGTTCATCTCCTCAAGAACCTTGACCATGATTCCATCATAACCTTCCATGCTTCTTGGATTGATGTCAACCGCAGAACCTTCAACTTCATCACTGAATTGTTCACCTCTGGCACTCTTAGACAGTATAGACATAAGTACCAGAGAGTAGATATCCGAGCGGTGAAGAATTGGGCTCGACAAATTCTAAGTGGTTTGGAGTACTTACACAGCCATGATCCTCCAGTAATTCATAGAGACCTCAAATGTGATAACATCTTTGTGAATGGCCATCTGGGGCAGGTCAAGATTGGTGATTTAGGCCTTGCAGCGATTCTTCGTGGCTCCCAACATGCTCACAGCGTCATAGGTACACCAGAATTTATGGCTCCAGAATTGTACGAAGAGGAATACAATGAGCTAGTAGACATATACTCCTTTGGGATGTGTATGATTGAGATGCTTACTTCTGAGTTTCCATACAGCGAGTGCTCCAACCCAGCTCAAATATACAAGAAAGTCACTTCGGGGAAGCTACCAGATGCGTTTTACAGAATCCAAGATTTGGAAGCCCAGAGCTTTGTGGGAAAATGTTTGGCAAATGTTTCGAAGAGGTTGCCAGCAAAGGAGCTCTTGTTGGACCCCTTTTTAGCCACGGTTCAACTTGAAAGACTGCCATCACCACCGCCAATTCAAACTCAAAAGTCCAAGTCCGCTGCATTAGTTGCCAAGGTGCATCCTTCCATGGACGACCAAACAAACAGCACAAACATGACAATCACCGGGACAATGAATGAAGAGGATGACACAGTTTTCCTTAAAGTACAAATATCTGACAAAAATGGGCATATTAGGAATATACACTTTCCCTTTGACACCATAAACGACACTGCAATGGACGTAGCAATGGAGATGGTCAAGGACTTAGAAATAAACGACTTGGAGCCATTGGAGATAGCTGTAATGATAGAGGAGGAGATATTAGCTTTGATTCCAACTTGGAAGGATTGGAGCACTTCTCAGTGTCCACGACAGCACAGCTTCAGATATGAAGAAGAGGACGATACAAGTAACCATCATCCTTTCTTCTCACCATCTTCCTGTTCTTCCTCTCACAGTTCTCTTCCAATGCTTGCCTCCTCCTGCAAGACCCACCTTGATGATATATTTCTGAATGACGATGCGAGCTCTGAAAGTTCAATGAACTCCTTCAAGTATTCAAATACAAACCATTATGAGTTGGGCATTGAAGATGATCAGCAGGATCATGCAAATGTGATAGGGTTCGACCATTTGTGCTGCACCCGAATGGCGAACAAGTGTACAAGATTCTGTCCTGCAAAAGAGATGGAAGAAGGTAATTACAGCAAACAGATGAGCAACAACAGAAGAATGAATTGTTGCAGGAGATGTGGTGATCATGGGTCATCATCGAGGCTAACGAGGATGCGTTCTTACGCGGATGTGAGGAGCCAGCAGCTGCAGAGATCTCTAATGGAGGAGATACACAAGAGAAGGATGTTCAAGACGGTTGGCGCCATTGAGAACATTGGCTTTCAGGACCCACGTGGAGGTCTGTTTCTGAACAAGCAGCAAGGATGCTTTTCACGCTGA 1962 0.4444 MIAKNYYEFSRGAVVEMAWIMLSVDYSSYIYSYLSVQLKIASPLFWVQFSAMLKGRLGGMAHTGYAETDPSGRYGRFKDVLGKGAMKTVYRAFDEVLGVEVAWNQVKLGDVFHSPEELQRLYSEVHLLKNLDHDSIITFHASWIDVNRRTFNFITELFTSGTLRQYRHKYQRVDIRAVKNWARQILSGLEYLHSHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIEMLTSEFPYSECSNPAQIYKKVTSGKLPDAFYRIQDLEAQSFVGKCLANVSKRLPAKELLLDPFLATVQLERLPSPPPIQTQKSKSAALVAKVHPSMDDQTNSTNMTITGTMNEEDDTVFLKVQISDKNGHIRNIHFPFDTINDTAMDVAMEMVKDLEINDLEPLEIAVMIEEEILALIPTWKDWSTSQCPRQHSFRYEEEDDTSNHHPFFSPSSCSSSHSSLPMLASSCKTHLDDIFLNDDASSESSMNSFKYSNTNHYELGIEDDQQDHANVIGFDHLCCTRMANKCTRFCPAKEMEEGNYSKQMSNNRRMNCCRRCGDHGSSSRLTRMRSYADVRSQQLQRSLMEEIHKRRMFKTVGAIENIGFQDPRGGLFLNKQQGCFSR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g2033 653 SUPERFAMILY Protein kinase-like (PK-like) 77 372 IPR011009 -
Glsi06g2033 653 Gene3D Transferase(Phosphotransferase) domain 1 158 338 - -
Glsi06g2033 653 Gene3D Phosphorylase Kinase; domain 1 61 156 - -
Glsi06g2033 653 Pfam Protein kinase domain 78 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g2033 653 ProSiteProfiles Protein kinase domain profile. 75 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g2033 653 FunFam probable serine/threonine-protein kinase WNK9 158 338 - -
Glsi06g2033 653 CDD STKc_WNK 73 333 - -
Glsi06g2033 653 SMART serkin_6 75 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g2033 653 FunFam Probable serine/threonine-protein kinase WNK1 60 156 - -
Glsi06g2033 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Glsi06g2033 653 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 65 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g2033 Glsi-ChrGlsi06 67634357 67638706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g2033 64 535 MAP Kinase Kinase Kinase AT3G51630 64.435 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Glsi06g2033 Pkinase 5.1e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g2033 06 67634357 67638706 Glsi06g2033 06 67634357 67638706 ECH