Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g2031 ATGACTATGTTTCAAGTGATGCGGGAGATGCACAGAGAAACCGTTGAAGAAGAAACAGAGTCCACGTCGTCCAAGGAAGAGGTGCAGGACGTGGTTTTGTTCGGGAAATACGAGCTCCTTAGGTTGCTGGGTGTCGGAGCATTCGCCAAGGTTTACGAGGCTACCAATGTGGTTACGGGGCAGCGCGTGGCGATCAAGGCCGTCAGCAAGCGCAAGGTTGTGGACGGTGGGAACGCGGCGCAATTTGAAAGGGAAATCGCTATCATGCGCCGCTTGCACCATCCCCACATCGTCAAGCTCTTCGAGGTCCTCGCCACCAAGACCAAGATTTACTTAGTCATGGAGTTCGCACAAGGCGGCGAGCTCTTTGACCAGGTCGTCGCTAAACGACGCTTCTCTGAAGATCTCGGCCGTCGATACTTCCAGCAGTTAATCTCCGCCGTTCACTACTGCCATTCCCGTGGGGTATTTCACCGCGACCTCAAGCTCGATAACCTCTTAATCGCCGACGACATGACCCTCAGGGTTTCGGACTTCGGGTTAAGCGCCGTGAAGGACCAGATCCGACCCGATGGGTTGCTCCACACTCTTTGTGGGACTCCGGCGTACTTGGCACCCGAGATGCTCGCGAAGAAAGGTTACGATGGAGCCACGGTGGATGTATGGGGATGCGGCGTTGTTTTGTTCGCGCTCATTGCCGGGTATTTGCCCTTCAACGACCAAAGCGCCACTGCCATGTTCAGGAAAATCTACCGGGGCCAGTTTCGGTTCCCCGTATGGGCTTCGCCCGATTTGCGACGATTCGTAACCCGCTTGCTCGACCCGAATCCCCAGACGAGGATTACCCTTGATGAGATCCTACGGGACCCATGGTTCGGCAAAGGGTACAGAGAGGTCAAGGTCCAGCAAAAGGACCCGGAATGGGAGGAGAACAGAACCAAGTGCTTAAACGCGTTCGATTTGATATCGTTCTCGTCGGGTTTTGACGTGTCGGGTTTGTTCAACGACCCGGATGTTTCGGATTGTGTGGAACGAATCGTGTCTGGGGAAGCACCGCAGAGGATAATGGCGGAGGTGGAGGAAGTGGCGAAGGCGGAGGGAGTGACAGTGACGACAAAGAAGGACGCGTACAGCGGAGCGAAGCTAGAGGGGCAGGATGGTAATTTAGTGATATGGCTTAGTATTTACCGGTTAACGGCTGAGCTGGTTGTGATCGAAATCAAGAAAAGGGAAAGAGAAGGGGCAGGCGGTGCACAATTTTGGAAACATAAGTTGAGGCTTCGCCTAGAAGAATTAGTTTATAAAACGGAAGCGCCGGTCATTAGGTGA 1329 0.5388 MTMFQVMREMHRETVEEETESTSSKEEVQDVVLFGKYELLRLLGVGAFAKVYEATNVVTGQRVAIKAVSKRKVVDGGNAAQFEREIAIMRRLHHPHIVKLFEVLATKTKIYLVMEFAQGGELFDQVVAKRRFSEDLGRRYFQQLISAVHYCHSRGVFHRDLKLDNLLIADDMTLRVSDFGLSAVKDQIRPDGLLHTLCGTPAYLAPEMLAKKGYDGATVDVWGCGVVLFALIAGYLPFNDQSATAMFRKIYRGQFRFPVWASPDLRRFVTRLLDPNPQTRITLDEILRDPWFGKGYREVKVQQKDPEWEENRTKCLNAFDLISFSSGFDVSGLFNDPDVSDCVERIVSGEAPQRIMAEVEEVAKAEGVTVTTKKDAYSGAKLEGQDGNLVIWLSIYRLTAELVVIEIKKREREGAGGAQFWKHKLRLRLEELVYKTEAPVIR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g2031 442 FunFam Maternal embryonic leucine zipper kinase 28 320 - -
Glsi06g2031 442 Gene3D Phosphorylase Kinase; domain 1 30 121 - -
Glsi06g2031 442 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
Glsi06g2031 442 Pfam Protein kinase domain 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g2031 442 Gene3D Kinase associated domain 1, KA1 312 435 - -
Glsi06g2031 442 Gene3D Transferase(Phosphotransferase) domain 1 122 298 - -
Glsi06g2031 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Glsi06g2031 442 ProSiteProfiles Protein kinase domain profile. 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g2031 442 SMART serkin_6 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g2031 442 SUPERFAMILY Protein kinase-like (PK-like) 33 307 IPR011009 -
Glsi06g2031 442 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 25 409 - -
Glsi06g2031 442 CDD CIPK_C 317 426 - -
Glsi06g2031 442 Pfam NAF domain 314 371 IPR004041 GO:0007165
Glsi06g2031 442 FunFam Non-specific serine/threonine protein kinase 18 118 - -
Glsi06g2031 442 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g2031 Glsi-ChrGlsi06 67594827 67596155 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g2031 32 438 CBL-interacting serine-threonine protein kinases AT2G30360 55.156 2.24e-162 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Glsi06g2031 Pkinase 3.6e-69 CL0016