Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g2021 ATGGCCTCCAGTGGGTATTTTTATATTGTCCTTCAAGCCTTGGTTTTAGCAGCGCTTGCAACCTCAGCTTTCTCAACATTGTCCCCGAACTTCTATGACCATTCTTGTCCTAAGGCTTTGAACACAATCAAACAAGTGGTTAAGGCTGCGGTGCAGAAGGAGCGTAGAATGGGGGCTTCTTTACTACGTTTGCATTTCCATGATTGTTTTGTTAACGTAGGTTGTGATGGTTCCATTCTTCTGGATCCCTCAGCCACCATTGACAGTGAAAAGAATGCTGTTCCTAATGCAAATGGGTCTGCAAGAGGATTTGATGTGGTGGATGAGATAAAGAAAGAGGTGGACGAAGCATGTGGAGGCCCAGTTGTTTCTTGCGCAGACATATTGGCTGTGGCAGCACGAGACTCTGTGGTTGCCGTAAGTCTATTTTCTTCCCTACTCCACCGTGTCACCTTCCATGTATCTTTTTCATATGCTTTGCTTGAATTATTAGGAGGACCAACATGGAACGTGAACTTGGGGAGAAGAGACTCCACCACAGCAAGCCGAGACACAGCAAACAGAGATATCCCAGCACCATTTATGGACCTTCCTCAACTCATTACCAACTTCAAGAACCAAGGCCTTGACCAGAACGACCTAGTGGCTCTCTCTGGTGGCCACACCATTGGATTCGCGCGCTGTGTTTCTTTTAGGAACCATACCTATAATGACTCCAACATCAACCCCTTGTTCGCTAGAGAGCTCAAATACAGGTGCCCTATAAGTGGAGGTGACGACAACCTCGCATCTTTGGACCCAACACCTGGTACCTTTGACGTTGCCTATTTCGCCGGCTTGGTTCACAAGACAGGGCTTCTTCACTCTGATCAAGCACTCTATAATGGTGGTTCGACGGATGCGTTGGTCAGAAAGTATGGCTACGATTCAGAAGCTTTCTACGGAGATTTTGCCAACTCTATGATAAAGATGGGAAATATAAAACCTCTCACTGGGAATCAGGGTGAAATTCGTTTGAACTGCAGGAAAGCGAACTAG 1038 0.4644 MASSGYFYIVLQALVLAALATSAFSTLSPNFYDHSCPKALNTIKQVVKAAVQKERRMGASLLRLHFHDCFVNVGCDGSILLDPSATIDSEKNAVPNANGSARGFDVVDEIKKEVDEACGGPVVSCADILAVAARDSVVAVSLFSSLLHRVTFHVSFSYALLELLGGPTWNVNLGRRDSTTASRDTANRDIPAPFMDLPQLITNFKNQGLDQNDLVALSGGHTIGFARCVSFRNHTYNDSNINPLFARELKYRCPISGGDDNLASLDPTPGTFDVAYFAGLVHKTGLLHSDQALYNGGSTDALVRKYGYDSEAFYGDFANSMIKMGNIKPLTGNQGEIRLNCRKAN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g2021 345 Gene3D - 30 342 - -
Glsi06g2021 345 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Glsi06g2021 345 Gene3D Peroxidase, domain 2 191 324 - -
Glsi06g2021 345 Pfam Peroxidase 44 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2021 345 CDD secretory_peroxidase 27 343 IPR033905 GO:0004601|GO:0042744
Glsi06g2021 345 PANTHER PEROXIDASE 72-RELATED 25 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2021 345 FunFam Peroxidase 191 324 - -
Glsi06g2021 345 PRINTS Haem peroxidase superfamily signature 265 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2021 345 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2021 345 PRINTS Haem peroxidase superfamily signature 213 228 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2021 345 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2021 345 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2021 345 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2021 345 PRINTS Plant peroxidase signature 165 180 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2021 345 PRINTS Plant peroxidase signature 263 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2021 345 PRINTS Plant peroxidase signature 319 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2021 345 PRINTS Plant peroxidase signature 212 224 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2021 345 PRINTS Plant peroxidase signature 279 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2021 345 SUPERFAMILY Heme-dependent peroxidases 27 345 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi06g2021 345 ProSiteProfiles Plant heme peroxidase family profile. 26 345 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2021 345 ProSitePatterns Peroxidases proximal heme-ligand signature. 213 223 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g2021 Glsi-ChrGlsi06 67523069 67524576 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g2021 27 345 Peroxidase AT5G05340 53.727 1.90e-111 325