Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g2018 ATGGCCTCCAGTGGGTATTTTTATATTGTCCTCCATGCCTTGGTTTTAGCAGCGCTTGCAACCTCAGCTTTCTCAACATTGTCTCCGAACTTCTATGACCATTCTTGCCCTAAGGCTTTGAACACAATCAAACAAGTGGTTAAGGCTGCGGTGCAGAAGGAGCGTAGAATGGGGGCTTCTTTACTACGTTTGCATTTCCATGATTGTTTTGTTAACGGTTGTGATGGTTCCATTCTTCTGGATTCCACAGCCACCATTGACAGTGAAAAGAATGCTGTCCCTAATGCAAATGGGTCTGCAAGAGGATTTGATGTGGTGGATGAGATAAAGAAAGAGGTGGACGAAGCATGTGGAGGCCCAGTTGTTTCTTGCGCAGACATATTGGCTGTGGCAGCTCGAGACTCTGTGGTTGCCTTAGGAGGACCAACATGGAACGTGAACTTGGGGAGAAGAGACTCCACCACAGCAAGCCGAGACACAGCAAACAGAGATATCCCAGCACCATCTATGGACCTTCCTCAACTCATTACCAACTTCGAGAACCAAGGCCTTAATCAGAACGACCTAGTGGCTCTCTCTGGTGGCCACACCATTGGATTCGCGCGCTGTGTTTCTTTTAGGAACCATACCTATAATGACTCCAACATCAACCCCTTGTTCGCAAAATTGCTCAAATACAGGTGCCCTATAAGTGGAGGTGACGACAACCTCGCACCTCTGGACCCAACACCCGGTACCTTTGACGTTGCTTATTTCGCCGGCTTGGTTCACAAGACAGGGCTTCTTCACTCTGATCAAGCACTCTTCAATGGTGGTTCGACGGATGCTTTGGTCAGAAAGTATGGCTACGATTCAGAATCTTTCTACGGAGATTTTGCCAACTCTATGATAAAGATGGGAAATATAAAACCTCTCACTGGGAATCAGGGTGAAATCCGTTTGAACTGCAGGAAAGCGAACTAG 963 0.4725 MASSGYFYIVLHALVLAALATSAFSTLSPNFYDHSCPKALNTIKQVVKAAVQKERRMGASLLRLHFHDCFVNGCDGSILLDSTATIDSEKNAVPNANGSARGFDVVDEIKKEVDEACGGPVVSCADILAVAARDSVVALGGPTWNVNLGRRDSTTASRDTANRDIPAPSMDLPQLITNFENQGLNQNDLVALSGGHTIGFARCVSFRNHTYNDSNINPLFAKLLKYRCPISGGDDNLAPLDPTPGTFDVAYFAGLVHKTGLLHSDQALFNGGSTDALVRKYGYDSESFYGDFANSMIKMGNIKPLTGNQGEIRLNCRKAN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g2018 320 Gene3D Peroxidase, domain 2 166 299 - -
Glsi06g2018 320 CDD secretory_peroxidase 27 318 IPR033905 GO:0004601|GO:0042744
Glsi06g2018 320 FunFam Peroxidase 166 299 - -
Glsi06g2018 320 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Glsi06g2018 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Glsi06g2018 320 PANTHER PEROXIDASE 72-RELATED 25 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 FunFam Peroxidase 30 175 - -
Glsi06g2018 320 Pfam Peroxidase 44 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 ProSiteProfiles Plant heme peroxidase family profile. 26 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 SUPERFAMILY Heme-dependent peroxidases 27 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 Gene3D - 30 320 - -
Glsi06g2018 320 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2018 320 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g2018 Glsi-ChrGlsi06 67499562 67501062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g2018 27 320 Peroxidase AT5G05340 59.596 2.17e-122 352