Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g2017 ATGGCGCCTAGTTCTTCCCGAATCGCTTTTTCAGATTTGAAGCTCAGCTTCTGTTTATTTTCAGCACTTTCTGTTGGGATAGTCTCAGCTCAGTTAAGCTCTGATTTTTATGCAACTTCATGTCCTAATGCCTCTGCTATCATTAAGTCCGCAGTGGAGGCAGCTGTGAACAACGAGAATCGCATGGGGGCTTCATTGCTTCGTCTCCATTTCCACGATTGCTTTGTTCAAGGATGTGATGCATCAGTATTACTAGATGACACATCAAGTTTCACGGGCGAAAAGACAGCTTTTCCCAACAATAATTCAATTCGAGGTTTTGATGTCATAGACACAATAAAAACTCAAGTGGAGAGTGTGTGCCCTGGCGTTGTGTCTTGTGCAGATATTGTAGCCGTTGCTGCTAGAGACTCAGTCGTTGCTCTTAGTGGACCTAGTTGGACAGTGTCGTTGGGAAGAAGAGATTCAACTACAGCAAGTTTAAGCGGAGCTAATTCTGACTTACCTGGTCCTACTTCAAATCTAAGTGACCTTATTACTACTTTCTCCAACAAAGGTTTCACCACCAACGAAATGGTTGCTCTTTCAGGATCTCACACAATCGGGCAAGCAAGGTGTGTAAACTTCAGAACAAGGATTTACAACGAGGCGAATATTGATTCCTCTTTTGCAACAGCATTGCAAGCAAATTGTCCAAGCACTGGTGGTGATGACAATTTGGCCCCTCTTGACACTACCTCTCAAAACACCTTTGACAATGCTTACTTCACCAATTTGTTAAGCCAAAAGGGTCTTTTACACTCAGATCAACAGCTCTTCAATAATGGATCCACAGACTCTCAAGTCACCGGTTATAGCAACAACCCTAGTACTTTCAGTTCAGACTTTGCTGATGCCATGGTTAAGATGGGTAACCTTAGCCCCCTCACCGGCACCGACGGTCAAATTAGGACCAATTGTAGGTCTGTCAATTCATGA 978 0.4366 MAPSSSRIAFSDLKLSFCLFSALSVGIVSAQLSSDFYATSCPNASAIIKSAVEAAVNNENRMGASLLRLHFHDCFVQGCDASVLLDDTSSFTGEKTAFPNNNSIRGFDVIDTIKTQVESVCPGVVSCADIVAVAARDSVVALSGPSWTVSLGRRDSTTASLSGANSDLPGPTSNLSDLITTFSNKGFTTNEMVALSGSHTIGQARCVNFRTRIYNEANIDSSFATALQANCPSTGGDDNLAPLDTTSQNTFDNAYFTNLLSQKGLLHSDQQLFNNGSTDSQVTGYSNNPSTFSSDFADAMVKMGNLSPLTGTDGQIRTNCRSVNS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g2017 325 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 FunFam Peroxidase 169 303 - -
Glsi06g2017 325 Gene3D - 35 321 - -
Glsi06g2017 325 FunFam Peroxidase 35 176 - -
Glsi06g2017 325 SUPERFAMILY Heme-dependent peroxidases 31 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 CDD secretory_peroxidase 31 323 IPR033905 GO:0004601|GO:0042744
Glsi06g2017 325 Pfam Peroxidase 49 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Glsi06g2017 325 PANTHER PEROXIDASE 72-RELATED 27 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 Gene3D Peroxidase, domain 2 169 303 - -
Glsi06g2017 325 ProSiteProfiles Plant heme peroxidase family profile. 31 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2017 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g2017 Glsi-ChrGlsi06 67494242 67497237 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g2017 27 324 Peroxidase AT5G05340 65.333 3.18e-147 416