Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g2016 ATGGATCACACCGAGATCCAAACATTTCCCATAACCATATCTGCTAGCTCTTTAATTTCTTCCTCCATGGCATTTCCTAACTTCAAACTTAGCTTCTTATTGTTGGCTTGTCTTGTTGGGATAGTCTCAGCTCAGTTATCCTCTGATTTTTACGCCACAAAGTGTCCTAAAGCCTTTTCTATCATTGAGGCAGCAGTAAAATCTGCTGTGGCAAAAGAGGCTCGCATGGGAGCATCCCTACTCCGTCTTCATTTCCATGATTGTTTTGTTCAAGGATGTGATGCCTCAATTCTATTAGATGATACATCAACTTTCACAGGGGAGAAGACAGCTTTTCCAAACGTCAAGTCGGTTAGAGGTTTCGAAGTAATAGACAACATAAAATCTCAAGTGGAGAGTTTGTGCCCTGGCGTTGTCTCTTGCGCTGATATCGTCGCAGTTGCTGCTAGGGACTCTGTCGTTGCTCTGGGGGGACCTAGTTGGACGGTTCAATTGGGAAGAAGAGATTCAACCACAGCAAGTTTAAATCTTGCTAATTCAGACTTGCCAAGACCCACTTCGGATCTCGCCGTCCTTATCTCTGGTTTCTCCAATAAAGGTTTCACCGCCAAAGAATTGGTTGCCCTATCAGGATCTCACACAATAGGGCAAGCGAGGTGTACAAACTTCAGAACAAGGATATACAACGAGACCAACATTGATTCCTCATTCGCAACATCGTTACAAGGAAATTGTCCCAGCGCAGGTGGTGATGACAATTTGTCCCCTATTGACACCACCACTCCAAACTCCTTTGACAATGCTTACTACAAGAACTTATTGAGCAAAAAGGGTCTCTTCCACTCAGATCAACAGCTCTTCAATGGAGGATCCACAGACTCTCAAGTCACTGCTTATAGCAACAATCCCGCAAGTTTCAAAACTGACTTTGCCAACGCTATGGTTAAAATGGGCAACCTTAGCCCTCTCACTGGCTCCAACGGTCAGATTAGGACAACCTGTGGAAAGGTCAATTGA 1017 0.4444 MDHTEIQTFPITISASSLISSSMAFPNFKLSFLLLACLVGIVSAQLSSDFYATKCPKAFSIIEAAVKSAVAKEARMGASLLRLHFHDCFVQGCDASILLDDTSTFTGEKTAFPNVKSVRGFEVIDNIKSQVESLCPGVVSCADIVAVAARDSVVALGGPSWTVQLGRRDSTTASLNLANSDLPRPTSDLAVLISGFSNKGFTAKELVALSGSHTIGQARCTNFRTRIYNETNIDSSFATSLQGNCPSAGGDDNLSPIDTTTPNSFDNAYYKNLLSKKGLFHSDQQLFNGGSTDSQVTAYSNNPASFKTDFANAMVKMGNLSPLTGSNGQIRTTCGKVN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g2016 338 ProSitePatterns Peroxidases active site signature. 77 88 IPR019794 GO:0004601
Glsi06g2016 338 ProSiteProfiles Plant heme peroxidase family profile. 45 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 Pfam Peroxidase 63 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 PANTHER PEROXIDASE 72-RELATED 40 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 205 215 IPR019793 -
Glsi06g2016 338 Gene3D - 49 334 - -
Glsi06g2016 338 FunFam Peroxidase 183 317 - -
Glsi06g2016 338 SUPERFAMILY Heme-dependent peroxidases 45 338 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 Gene3D Peroxidase, domain 2 183 317 - -
Glsi06g2016 338 PRINTS Haem peroxidase superfamily signature 77 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 PRINTS Haem peroxidase superfamily signature 157 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 PRINTS Haem peroxidase superfamily signature 258 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 PRINTS Haem peroxidase superfamily signature 139 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 PRINTS Haem peroxidase superfamily signature 205 220 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 CDD secretory_peroxidase 45 337 IPR033905 GO:0004601|GO:0042744
Glsi06g2016 338 PRINTS Plant peroxidase signature 204 216 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 PRINTS Plant peroxidase signature 157 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 PRINTS Plant peroxidase signature 272 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 PRINTS Plant peroxidase signature 256 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 PRINTS Plant peroxidase signature 138 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 PRINTS Plant peroxidase signature 119 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 PRINTS Plant peroxidase signature 55 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 PRINTS Plant peroxidase signature 79 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi06g2016 338 FunFam Peroxidase 49 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g2016 Glsi-ChrGlsi06 67486066 67488214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g2016 41 338 Peroxidase AT5G05340 66.000 6.13e-150 423