Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi06g1994 | ATGGCTTCCCCTGCTCCTCCAAATTTGAATTCAAACCCAAGCTTTTCCTCACTTCCAAACCATTTCATGAGCACCTCTTTCACTGAGCTACTTTCCTTCAATATGGATGATGTTCCCAAATTCAAGACTCTTCCACCTCCTTCCTTACCCCTCTCTCCCTCCCCAGCTTCTCCTTCTTCTTATTTGGCTATCCCAGCTGGGTTTAGTCCTACACAGTTCTTGAACTCGCCTTTGTTTCTTTCCTCCCCAAATATTTTTTCATCTCCTGAGAGCTTCAACTGGAGAAACAGTTCAAGCGAGGACCAACAAAGTAACAAGGAGGAAGAGAAAACCTACTCTGACTTCTCTTTTCAAACACAGACAAACCCCTCATCCCTGTTTCAATATTCTTCTTCAAGCATGTTTCAAGCTCAGGAAACACTGAAACAAGAACCATGGAAGTTGAATGAACCAGCGCAGCAATCCCATTTTTCATCTGAGAAGACAGCAACAAAATCTGAATATCAATCAACTCAGAGCTTCTCCTCAGAAATGGCTGCAGCCAAACCACAAGTACAAAGTAATTCAGCACCTGGTTCTGGCTATTTTAATTACACTAATTCGTCTCAGTCTATTAGAGAGCAAAGGAGGTCAGAAGATGGGTACAACTGGAGAAAATATGGGCAGAAACAAGTGAAAGGAAGCGAAAATCCACGCAGTTATTACAAGTGCACACATCCAAGTTGCTCAATGAAGAAGAAAGTTGAGAGGTCTTTGGATGGACAAATCACTGAAATAGTATATAAGGGAAGCCATAACCATCTCAAGCCCCAGTCTACAAGAAGAACTAGTTCTCAACCAATCCAACCTTCTTCCTCCTGCACCAACTCTGGTATTTCTGATCAATCAGTGGTGACCCTAGGCAATCCACAGATGGAGCCTGCCTCGATACGAGAAGATTCTTCAGTCTCTGTTGGAGAGGAAGATTTTGAGCAAACCTCACGAACCTGTTACTCTGGCAGAGATGATGATGACTTTGGCTCTGATGCCAAAAGATGGAAAGGAGAGAATGAAATTGACGGCTATTCCACCTCTGGGAGTAGAACTGTGAGGGAACCAAGAGTTGTAGTTCAAACTACAAGTGAGATTGACATACTTGATGATGGCTTTAGGTGGAGAAAATATGGACAGAAAGTAGTAAAGGGAAATCCAAACCCAAGGAGCTACTACAAATGCACAGCCTCTGGTTGTTCGGTGAGAAAACATGTTGAGCGAGCTGCACATGATATGAAAGCTGTGATCACAACTTATGAAGGGAAACACAACCATGATGTTCCTGCAGCACGAGGCAGTGGGAGTTATAATGCAAACGTAACTTCACAGAACAGCAACAACACCAGCAGCATTGTACCTGCGCCTATAAGGCCCTCAGCAGTGACCAATCATTATAGCACACCAAGTTTCACAAATTCACTTTACAACACAAGGCTACCACCAACATCTGAAAGTCAAGAACCATTTCCACTGGACCTCCTGCAGAGCCCAGCAAGTTTTGGGTTTTCAGACTTCGGAAGATCAATAAGCTCATACAACAATCATGCACAATATTCAGATGCTGCATACTCCAAGGCCAAGGATGAGAGAAAGGATGACTCATTCCTTCAGTCGTTTATGTCGAGGAACTTCTAA | 1668 | 0.4341 | MASPAPPNLNSNPSFSSLPNHFMSTSFTELLSFNMDDVPKFKTLPPPSLPLSPSPASPSSYLAIPAGFSPTQFLNSPLFLSSPNIFSSPESFNWRNSSSEDQQSNKEEEKTYSDFSFQTQTNPSSLFQYSSSSMFQAQETLKQEPWKLNEPAQQSHFSSEKTATKSEYQSTQSFSSEMAAAKPQVQSNSAPGSGYFNYTNSSQSIREQRRSEDGYNWRKYGQKQVKGSENPRSYYKCTHPSCSMKKKVERSLDGQITEIVYKGSHNHLKPQSTRRTSSQPIQPSSSCTNSGISDQSVVTLGNPQMEPASIREDSSVSVGEEDFEQTSRTCYSGRDDDDFGSDAKRWKGENEIDGYSTSGSRTVREPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNPRSYYKCTASGCSVRKHVERAAHDMKAVITTYEGKHNHDVPAARGSGSYNANVTSQNSNNTSSIVPAPIRPSAVTNHYSTPSFTNSLYNTRLPPTSESQEPFPLDLLQSPASFGFSDFGRSISSYNNHAQYSDAAYSKAKDERKDDSFLQSFMSRNF | 555 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi06g1994 | 555 | FunFam | WRKY transcription factor 33 | 366 | 432 | - | - | |
Glsi06g1994 | 555 | MobiDBLite | consensus disorder prediction | 147 | 235 | - | - | |
Glsi06g1994 | 555 | Pfam | WRKY DNA -binding domain | 380 | 436 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Glsi06g1994 | 555 | Pfam | WRKY DNA -binding domain | 212 | 267 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Glsi06g1994 | 555 | SMART | WRKY_cls | 379 | 438 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Glsi06g1994 | 555 | SMART | WRKY_cls | 211 | 269 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Glsi06g1994 | 555 | SUPERFAMILY | WRKY DNA-binding domain | 371 | 439 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Glsi06g1994 | 555 | ProSiteProfiles | WRKY domain profile. | 374 | 439 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Glsi06g1994 | 555 | SUPERFAMILY | WRKY DNA-binding domain | 207 | 270 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Glsi06g1994 | 555 | Gene3D | WRKY domain | 366 | 432 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Glsi06g1994 | 555 | MobiDBLite | consensus disorder prediction | 93 | 118 | - | - | |
Glsi06g1994 | 555 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 75 | 459 | IPR044810 | GO:0003700 | |
Glsi06g1994 | 555 | MobiDBLite | consensus disorder prediction | 266 | 311 | - | - | |
Glsi06g1994 | 555 | MobiDBLite | consensus disorder prediction | 262 | 359 | - | - | |
Glsi06g1994 | 555 | MobiDBLite | consensus disorder prediction | 147 | 205 | - | - | |
Glsi06g1994 | 555 | ProSiteProfiles | WRKY domain profile. | 206 | 270 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Glsi06g1994 | 555 | FunFam | WRKY transcription factor | 199 | 271 | - | - | |
Glsi06g1994 | 555 | Gene3D | WRKY domain | 197 | 271 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Glsi06g1994 | 555 | MobiDBLite | consensus disorder prediction | 327 | 351 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi06g1994 | Glsi-ChrGlsi06 | 67247063 | 67249788 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi06g1994 | 206 | 551 | WRKY Transcription Factor Family | AT2G38470 | 55.220 | 5.55e-112 | 342 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Glsi06g1994 | WRKY | 1.1e-24 | CL0274 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Glsi06g1994 | 06 | 67247063 | 67249788 | Glsi06g1994 | 06 | 67247063 | 67249788 | ECH |