Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1994 ATGGCTTCCCCTGCTCCTCCAAATTTGAATTCAAACCCAAGCTTTTCCTCACTTCCAAACCATTTCATGAGCACCTCTTTCACTGAGCTACTTTCCTTCAATATGGATGATGTTCCCAAATTCAAGACTCTTCCACCTCCTTCCTTACCCCTCTCTCCCTCCCCAGCTTCTCCTTCTTCTTATTTGGCTATCCCAGCTGGGTTTAGTCCTACACAGTTCTTGAACTCGCCTTTGTTTCTTTCCTCCCCAAATATTTTTTCATCTCCTGAGAGCTTCAACTGGAGAAACAGTTCAAGCGAGGACCAACAAAGTAACAAGGAGGAAGAGAAAACCTACTCTGACTTCTCTTTTCAAACACAGACAAACCCCTCATCCCTGTTTCAATATTCTTCTTCAAGCATGTTTCAAGCTCAGGAAACACTGAAACAAGAACCATGGAAGTTGAATGAACCAGCGCAGCAATCCCATTTTTCATCTGAGAAGACAGCAACAAAATCTGAATATCAATCAACTCAGAGCTTCTCCTCAGAAATGGCTGCAGCCAAACCACAAGTACAAAGTAATTCAGCACCTGGTTCTGGCTATTTTAATTACACTAATTCGTCTCAGTCTATTAGAGAGCAAAGGAGGTCAGAAGATGGGTACAACTGGAGAAAATATGGGCAGAAACAAGTGAAAGGAAGCGAAAATCCACGCAGTTATTACAAGTGCACACATCCAAGTTGCTCAATGAAGAAGAAAGTTGAGAGGTCTTTGGATGGACAAATCACTGAAATAGTATATAAGGGAAGCCATAACCATCTCAAGCCCCAGTCTACAAGAAGAACTAGTTCTCAACCAATCCAACCTTCTTCCTCCTGCACCAACTCTGGTATTTCTGATCAATCAGTGGTGACCCTAGGCAATCCACAGATGGAGCCTGCCTCGATACGAGAAGATTCTTCAGTCTCTGTTGGAGAGGAAGATTTTGAGCAAACCTCACGAACCTGTTACTCTGGCAGAGATGATGATGACTTTGGCTCTGATGCCAAAAGATGGAAAGGAGAGAATGAAATTGACGGCTATTCCACCTCTGGGAGTAGAACTGTGAGGGAACCAAGAGTTGTAGTTCAAACTACAAGTGAGATTGACATACTTGATGATGGCTTTAGGTGGAGAAAATATGGACAGAAAGTAGTAAAGGGAAATCCAAACCCAAGGAGCTACTACAAATGCACAGCCTCTGGTTGTTCGGTGAGAAAACATGTTGAGCGAGCTGCACATGATATGAAAGCTGTGATCACAACTTATGAAGGGAAACACAACCATGATGTTCCTGCAGCACGAGGCAGTGGGAGTTATAATGCAAACGTAACTTCACAGAACAGCAACAACACCAGCAGCATTGTACCTGCGCCTATAAGGCCCTCAGCAGTGACCAATCATTATAGCACACCAAGTTTCACAAATTCACTTTACAACACAAGGCTACCACCAACATCTGAAAGTCAAGAACCATTTCCACTGGACCTCCTGCAGAGCCCAGCAAGTTTTGGGTTTTCAGACTTCGGAAGATCAATAAGCTCATACAACAATCATGCACAATATTCAGATGCTGCATACTCCAAGGCCAAGGATGAGAGAAAGGATGACTCATTCCTTCAGTCGTTTATGTCGAGGAACTTCTAA 1668 0.4341 MASPAPPNLNSNPSFSSLPNHFMSTSFTELLSFNMDDVPKFKTLPPPSLPLSPSPASPSSYLAIPAGFSPTQFLNSPLFLSSPNIFSSPESFNWRNSSSEDQQSNKEEEKTYSDFSFQTQTNPSSLFQYSSSSMFQAQETLKQEPWKLNEPAQQSHFSSEKTATKSEYQSTQSFSSEMAAAKPQVQSNSAPGSGYFNYTNSSQSIREQRRSEDGYNWRKYGQKQVKGSENPRSYYKCTHPSCSMKKKVERSLDGQITEIVYKGSHNHLKPQSTRRTSSQPIQPSSSCTNSGISDQSVVTLGNPQMEPASIREDSSVSVGEEDFEQTSRTCYSGRDDDDFGSDAKRWKGENEIDGYSTSGSRTVREPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNPRSYYKCTASGCSVRKHVERAAHDMKAVITTYEGKHNHDVPAARGSGSYNANVTSQNSNNTSSIVPAPIRPSAVTNHYSTPSFTNSLYNTRLPPTSESQEPFPLDLLQSPASFGFSDFGRSISSYNNHAQYSDAAYSKAKDERKDDSFLQSFMSRNF 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1994 555 FunFam WRKY transcription factor 33 366 432 - -
Glsi06g1994 555 MobiDBLite consensus disorder prediction 147 235 - -
Glsi06g1994 555 Pfam WRKY DNA -binding domain 380 436 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g1994 555 Pfam WRKY DNA -binding domain 212 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g1994 555 SMART WRKY_cls 379 438 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g1994 555 SMART WRKY_cls 211 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g1994 555 SUPERFAMILY WRKY DNA-binding domain 371 439 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi06g1994 555 ProSiteProfiles WRKY domain profile. 374 439 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g1994 555 SUPERFAMILY WRKY DNA-binding domain 207 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi06g1994 555 Gene3D WRKY domain 366 432 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi06g1994 555 MobiDBLite consensus disorder prediction 93 118 - -
Glsi06g1994 555 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 75 459 IPR044810 GO:0003700
Glsi06g1994 555 MobiDBLite consensus disorder prediction 266 311 - -
Glsi06g1994 555 MobiDBLite consensus disorder prediction 262 359 - -
Glsi06g1994 555 MobiDBLite consensus disorder prediction 147 205 - -
Glsi06g1994 555 ProSiteProfiles WRKY domain profile. 206 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g1994 555 FunFam WRKY transcription factor 199 271 - -
Glsi06g1994 555 Gene3D WRKY domain 197 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi06g1994 555 MobiDBLite consensus disorder prediction 327 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1994 Glsi-ChrGlsi06 67247063 67249788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1994 206 551 WRKY Transcription Factor Family AT2G38470 55.220 5.55e-112 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi06g1994 WRKY 1.1e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g1994 06 67247063 67249788 Glsi06g1994 06 67247063 67249788 ECH