Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1989 ATGGGAAATTGTTGCAGTCACGATGTTTCGTGCCGAAACTCTGTGGAAAACGAGTTGGATAATAATGAACATGATCGTGGAGAGGATAATTATACCACATATGGAGATGGTGGAGCTCGTGTAAGGTTCAGGGGATCCTCCAGGTTTGTGTCAATGTACAGCCAACAGGGAAGAAAAGGAGTTAATCAAGATGCAATGACTGTTTGGGAGGACTTCACTGGAGAAAAAGACATGATCTTTTGTGGTGTGTTCGATGGTCACGGTCCTGTTGGGCACAAGGTTGCTCGTTATATCCGCAACAATCTACCCACAAAGCTCTCTGCAGCTATTAAAATGTCACGACAGAAGGGCTGCAAATACTATGATGCCAATTCTACAGATGATGTCTTTGATGAAAATGACAATAACATGCCCCTTTCTTCATGGGAGAGCAGCCTCCTGAAATCCTTCAATGAGATGGATGAAGCCATTGCTCGGGACATCAACACCGACAGCTTTTACAGTGGTAGCACTGCTGTAACTGTTATTAAACAGGGTGACCATCTGATAATTGGCAATTTGGGGGATTCTCGTGCAGTTCTTTGCACAAGAGGATATAGAGACCAACTTGTTCCTGTTCAACTTACTGTTGACTTGAAACCGGATATTCCAAGTGAAGCTTCAAGAATCCGCAACTGTGAAGGCAGAGTTTTTGCTGAAGAAGAAGAGCCTGATGTGTTCAGAATATGGATGCCTGATGAAGACTGCCCTGGACTAGCTATGTCAAGAGCCTTTGGAGATTTTTGCCTGAAAGATTATGGCCTCATCTCAGTCCCTGACGTCTTCTACAGAAAAATAACCAAGCAGGATGAATTTGTGGTTTTAGCAACTGATGGGGTTTGGGATGTGCTGACAAACAACGAAGTAATAGACATAGTCGCTTCAGCACCAAGGAGGTCCATAGCAGCAAAAATGTTAGTGAAGTGTGCTGTTCAGGCATGGAGATACAAGTACCCTCATTCCAAGGTTGATGATTGTGCAGTGATATGCTTGTTCCTGAATGACCAGCCGGTTTTAACCAAATCTGCATCCAAGGTTACTGGAGAAAATAGGCATCAAAGGAAGCAGCATCATGGCTTTAAATCCAGCAGAAATGAAGACACTGAGAGTGCGGAAGGCATGGGTTCAGGAGAATCAAAGCAAGAATGGGATGCTCTTGGAGGGTTAGTTAGAGCCAACTCTCTGTCAAAAATTCCAAGGTTCACGAGGGATCCGAGTAGACGGCAACAACCATCTCAGTACCTTGACAAGGTTGAAGTTCGCTAG 1305 0.4437 MGNCCSHDVSCRNSVENELDNNEHDRGEDNYTTYGDGGARVRFRGSSRFVSMYSQQGRKGVNQDAMTVWEDFTGEKDMIFCGVFDGHGPVGHKVARYIRNNLPTKLSAAIKMSRQKGCKYYDANSTDDVFDENDNNMPLSSWESSLLKSFNEMDEAIARDINTDSFYSGSTAVTVIKQGDHLIIGNLGDSRAVLCTRGYRDQLVPVQLTVDLKPDIPSEASRIRNCEGRVFAEEEEPDVFRIWMPDEDCPGLAMSRAFGDFCLKDYGLISVPDVFYRKITKQDEFVVLATDGVWDVLTNNEVIDIVASAPRRSIAAKMLVKCAVQAWRYKYPHSKVDDCAVICLFLNDQPVLTKSASKVTGENRHQRKQHHGFKSSRNEDTESAEGMGSGESKQEWDALGGLVRANSLSKIPRFTRDPSRRQQPSQYLDKVEVR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1989 434 Pfam Protein phosphatase 2C 63 311 IPR001932 -
Glsi06g1989 434 ProSiteProfiles PPM-type phosphatase domain profile. 49 346 IPR001932 -
Glsi06g1989 434 MobiDBLite consensus disorder prediction 356 396 - -
Glsi06g1989 434 MobiDBLite consensus disorder prediction 409 434 - -
Glsi06g1989 434 CDD PP2Cc 48 346 IPR001932 -
Glsi06g1989 434 SUPERFAMILY PP2C-like 46 348 IPR036457 -
Glsi06g1989 434 PANTHER PROTEIN PHOSPHATASE 39 344 IPR015655 GO:0004722|GO:0006470
Glsi06g1989 434 SMART PP2C_4 38 344 IPR001932 -
Glsi06g1989 434 Gene3D - 43 348 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1989 Glsi-ChrGlsi06 67219928 67222562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1989 1 350 PP2C-type Phosphatase Gene Family AT5G01700 55.085 2.08e-131 382
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g1989 06 67219928 67222562 Glsi07g2124 07 65614904 65617673 CCT
Glsi06g1989 06 67219928 67222562 Glsi06g1989 06 67219928 67222562 ECH