Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1984 ATGGACGGCTATGATATGCTCATTTATGTTCACCTTGGTGATTACACAGCAAACTTAACTTCCATGTTAACGGAAGGGACGATGTTGGAGCCTGCATTCAGCGACGTAAAAGAGATTCGAAAGAACAACTACTTTGTGGGATATTCGAAGGGATCCTCCGTGGTGAAAGAGCTTCTTATTGAACACTTAAAATTCAAAGAGTATCAATTGAAGGCTTATGACATTCGTGAGGACTATCAATATGCACTGTCTCTAGGAAGCGAAAAGGGAGGTGTGGCTGCTATCTTTGATGAAACCCCCCATATCACGCTCCTCCTCTCCAAATATGGCTCCAAGATAGAGATCATGCAATTTTCTAGTAAGACACTGCAGAATCTTGATGCTATAGTTGGAGACATTACTATTGTATGGAATCGCACAAAGTGTGTTGATTTTACATTGCCATATGCAGAATCAAGCGTGTCAATGGTGGTTTCCATAGGGCGTAGCTTCAGCACGCGGGTCCTCTTAAAACCTTTTGATATGTATCTTTGGATATTTCTTGGTTCCATTTTTGTGGCTGCAACTGGTGCTGTAATTTTATTAGAGATGAGTAAGCACAAAAAGGAGGGGGGAGACCAAACAAAAATTAGCGAATTGATAGAGTGTCCTTTCACTGTTTACACTCGTGAGATCAAAGATTGGAAAAGCAATTTGTCAAAATGGACGGCGATGATATGTTCATTTATGTTCATCATGATGATCCAAATTTACACAGCAAATTTAACTTCTATGTTAGCGGAAGGGACGACGCCGGAGCCTGCATTCAGCGACATAGAAGAGATCAAAAACAACAACTACTCTGTGGGATATCCGAAGGGATCCTCGGTGGTGAAAGGGCTTCTTATTGAACATTTAAAATTCAAAGAGTATCAATTGAAGGCTTATGACAATCGTGAGGACTATCACCATGAACTATCTCTAGGAAGCAAAAAGGGAGGTGTGGCTGCTATCTTTGATGAAACCCCCTATATCATGCTCTTCCTCTCCAAATATGGCTCCAAGTATGACGTGGTTGGACCAAGATACCAAACAGGTGGATTCGGTTTTGCATTCCCTAAGAAATCTAGTCTGGTGCCATACTTTTCGGCTGCAATCTTAAATGTGACTGAAGATACACAGAAATTTCAATTCATGAAGAACGAGTACGCCTTGAGCTACGTTTCATGCGAATTCCAAAAATCTCCAAAGAGTCGAAGTTTGACTGTGAAAGACTTTGGGAAACTCTGGCCAGTAATAGCCTGTATTTTATGTTTCTTACTCTTCCTCGTTTATTTCAAATATATAGTGACCCTTCTACATAAGAAATTCAGCTCTTCCCCCTCTGCAAAACATGGAAGTGCAGGAAAAGAAGCAGCTTCTGTTACTCTACCAGATACTTCCTCCACGTCATAA 1434 0.4093 MDGYDMLIYVHLGDYTANLTSMLTEGTMLEPAFSDVKEIRKNNYFVGYSKGSSVVKELLIEHLKFKEYQLKAYDIREDYQYALSLGSEKGGVAAIFDETPHITLLLSKYGSKIEIMQFSSKTLQNLDAIVGDITIVWNRTKCVDFTLPYAESSVSMVVSIGRSFSTRVLLKPFDMYLWIFLGSIFVAATGAVILLEMSKHKKEGGDQTKISELIECPFTVYTREIKDWKSNLSKWTAMICSFMFIMMIQIYTANLTSMLAEGTTPEPAFSDIEEIKNNNYSVGYPKGSSVVKGLLIEHLKFKEYQLKAYDNREDYHHELSLGSKKGGVAAIFDETPYIMLFLSKYGSKYDVVGPRYQTGGFGFAFPKKSSLVPYFSAAILNVTEDTQKFQFMKNEYALSYVSCEFQKSPKSRSLTVKDFGKLWPVIACILCFLLFLVYFKYIVTLLHKKFSSSPSAKHGSAGKEAASVTLPDTSSTS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1984 477 SUPERFAMILY Periplasmic binding protein-like II 125 386 - -
Glsi06g1984 477 Gene3D - 27 168 - -
Glsi06g1984 477 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 15 112 IPR015683 -
Glsi06g1984 477 SMART GluR_14 22 394 IPR001320 GO:0015276|GO:0016020
Glsi06g1984 477 MobiDBLite consensus disorder prediction 453 477 - -
Glsi06g1984 477 Gene3D - 169 296 - -
Glsi06g1984 477 Pfam Bacterial extracellular solute-binding proteins, family 3 125 386 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1984 Glsi-ChrGlsi06 67145666 67156969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1984 127 441 Ion Channels AT2G29100 35.514 1.39e-39 150