Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1972 ATGAACAATCTTCCCCTCTTCTTCGTCCCTCTTCTCTTTCTCTTCCCCCACTCCCTTCTTTCTCTGTCCTCCGATGGCCTCGCTCTTCTCTCTCTTAAATCCGCCATTGACCAACCTCCCGGTACCTCCGCTTTCTCCGACTGGAACGACGGCGACCCAACTCCTTGCCTATGGTCTGGCATTTCCTGCATGAATATTACCGGATTACCCGAGCCTCGCGTTGTCGGAATTGCCCTCTCCGGGAAGAGTCTCCGGGGCTATATCCCCTCTGAGCTTGGCAGCTTGGACTATCTTCGCCGACTCAATCTCCACAGCAACAATTTCTATGGGTTCATCCCTGTTCAGCTCTTCAATGCTACTTCCCTTCACAGCATCTTCCTCTACGGTAACAACCTCTCCGGTCCCCTCCCTCCTTCGATCTGCAACATTCCTAGGCTGCAAAACATCGATCTCTCCAATAACTCCCTTTCGGGTCCTATCTCAGAGGAACTCAAGAATTGCAAGCAGTTGCAGAGACTAATTCTCTCTCGGAACAAGTTTTCTGGCGACATACCAAAAGGGGTGTGGTCGGAATTGGAGAACTTGGTTCAACTCGACCTTTCTGCAAACGAGCTGGAAGGGTCAATTCCGGAAGATATCGGTGAACTCAAGTCTCTCTCTGGTACGCTCAATCTGTCTTTCAATCATTTGTCTGGTAAAATTCCAAAATCACTGGGGAATTTGCCTGTTACTGTGAGTTTCGATCTTCAGAACAACAATTTTAGTGGCGAGATACCGCAAACGGGGTCGTTTGCAAACCAGGGCCCCACTGCGTTTCTGAACAATCCTCAGCTATGCGGATTTCCCCTCCAGAAATCATGCGGTAATTCAGCGCAGGGCTCACCAGAGAGTCCAAGTTCATCTCGGGAATCCGATAACCGTTCGACGAAAGGCCTAAGTCCCGGTTTAATCATACTAATCTCAGCGGCTGACGCAGCTGGGGTTGCACTAATTGGCCTTGTGGTTGTGTACATTTATTGGAAAAAGAAAGACAATTCCAATGGCTGTAGCTGCACAGGGAAGAGCAAGTTTGGTGGGCATGAGAAAGGACACATTTGTTCATTACCATGTATCAATGGTCTGAAAAGCGATGATTCTGAATTGGAGGAACCTGAAAAAGCAGAGGGTAGCAGAGGGGAAGGGGATTTGGTGGCCATTGATAAAGGCTTCAGCTTCGAGCTTGATGAACTTTTAAGGGCTTCGGCTTATGTATTGGGGAAGAGTGGATTGGGGATTGTGTATAAAGTGGTTCTGGGAAATGGGGTGCCTGTGGCTGTGAGAAGACTAGGGGAGGGTGGTGAACAGAGGTACAAGGAATTCGCTGCTGAGGTTCAGGCCATTGGGAAAGTGAAGCACCCTAACATTGTGAAGTTAAGAGCTTACTATTGGGCTCCTGACGAAAAGCTTCTGATTAGTGATTTCATCTCCAATGGCAATTTGGCCAATGCTCTGCGAGGCAGAAATGGTCAACCATCTCCAAACCTTTCATGGTCAATCAGGCTGAGAATTGCCAAAGGAACAGCCAGGGGCTTGGCCTATCTCCATGAATGCAGTCCAAGAAAATTCGTTCATGGTGACATTAAACCCTCCAATATACTCCTTGACAATGATTTCCAGCCTTACATTTCTGATTTTGGTCTCAACCGGCTGATCAATATCACCGGCAACAATCCCTCCTCTGGTGGCTTCATGGGCGGAGCTCTTCCTTACATGAAGGCATCGCAAACAGAGCGAACTAACAATTACAAAGCCCCTGAGGCTCGAGTCTCAGGCTGCAGACCAACCCAGAAATGGGATGTGTATTCATTTGGAGTTGTATTACTCGAATTGCTCACCGGGAAATCTCCAGATTCATCTCCCACCACATCAACTTCTGTGGAAGTCCCTGACTTGGTGAGGTGGGTGAAAAAAGGGTTTGAAGAAGAGAGCCCATTATCAGAAATGGTTGATCCGTCGCTGCTTCAAGAAGTGCATGCCAAGAAAGAGGTTCTATCTGTGTTTCATGTAGCACTAGCATGCACTGAAGGAGACCCTGAGATTCGACCTAGAATGAAAACTGTGTCTGAAAACCTTGAAAGGATCTGA 2124 0.4802 MNNLPLFFVPLLFLFPHSLLSLSSDGLALLSLKSAIDQPPGTSAFSDWNDGDPTPCLWSGISCMNITGLPEPRVVGIALSGKSLRGYIPSELGSLDYLRRLNLHSNNFYGFIPVQLFNATSLHSIFLYGNNLSGPLPPSICNIPRLQNIDLSNNSLSGPISEELKNCKQLQRLILSRNKFSGDIPKGVWSELENLVQLDLSANELEGSIPEDIGELKSLSGTLNLSFNHLSGKIPKSLGNLPVTVSFDLQNNNFSGEIPQTGSFANQGPTAFLNNPQLCGFPLQKSCGNSAQGSPESPSSSRESDNRSTKGLSPGLIILISAADAAGVALIGLVVVYIYWKKKDNSNGCSCTGKSKFGGHEKGHICSLPCINGLKSDDSELEEPEKAEGSRGEGDLVAIDKGFSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSPNLSWSIRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLNRLINITGNNPSSGGFMGGALPYMKASQTERTNNYKAPEARVSGCRPTQKWDVYSFGVVLLELLTGKSPDSSPTTSTSVEVPDLVRWVKKGFEEESPLSEMVDPSLLQEVHAKKEVLSVFHVALACTEGDPEIRPRMKTVSENLERI 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1972 707 ProSiteProfiles Protein kinase domain profile. 412 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1972 707 SMART serkin_6 416 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1972 707 Gene3D Ribonuclease Inhibitor 22 187 IPR032675 -
Glsi06g1972 707 FunFam Leucine-rich repeat receptor-like protein kinase 194 289 - -
Glsi06g1972 707 Pfam Leucine rich repeat 144 205 IPR001611 GO:0005515
Glsi06g1972 707 FunFam Leucine-rich repeat receptor-like protein kinase 395 487 - -
Glsi06g1972 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Glsi06g1972 707 SUPERFAMILY L domain-like 23 284 - -
Glsi06g1972 707 Gene3D Phosphorylase Kinase; domain 1 396 487 - -
Glsi06g1972 707 SUPERFAMILY Protein kinase-like (PK-like) 417 704 IPR011009 -
Glsi06g1972 707 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 22 190 - -
Glsi06g1972 707 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Glsi06g1972 707 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 153 707 IPR046959 -
Glsi06g1972 707 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 488 707 - -
Glsi06g1972 707 MobiDBLite consensus disorder prediction 286 309 - -
Glsi06g1972 707 Gene3D Transferase(Phosphotransferase) domain 1 488 707 - -
Glsi06g1972 707 Gene3D Ribonuclease Inhibitor 188 289 IPR032675 -
Glsi06g1972 707 CDD STKc_IRAK 418 707 - -
Glsi06g1972 707 PRINTS Leucine-rich repeat signature 146 159 - -
Glsi06g1972 707 PRINTS Leucine-rich repeat signature 192 205 - -
Glsi06g1972 707 Pfam Protein kinase domain 417 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1972 Glsi-ChrGlsi06 67018536 67022534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1972 20 707 Receptor kinase-like Gene Family AT1G67510 73.864 0.0 1019
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi06g1972 Pkinase 1.5e-33 CL0016