Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1971 ATGGGTAATCATGTAAGGATGATGATGAATGGTGCAATGGAGGGCCTTGTGTGGCACTGGTGAGAGACGATGAAGCAGGTGATAGGAATTGTGGTGTCAAACAAGATGCAGAAATCGGTGGTGGTTGCAGTGGATAGACTATTCCACAACAAATTATACAACCGTTATGTCAAACGAACCTCTAAATTTATGGCACATGATGAGAACAATGTTTGTAATATGGGTGACCGAGTTCGACTAGATCCTTCCAGACCTTTGAGCAAGCACAAGCATTGGGTTGTTGCTGAAATTCTCAAGAAAGCACGAATATATGTTCCACCTTCCACACCCATGACTGACAATCCGAGCTCCAGCTCTGAAGCTCCTGCTTCCTAA 375 0.4427 MGNHVRMMMNGAMEGLVWHWXETMKQVIGIVVSNKMQKSVVVAVDRLFHNKLYNRYVKRTSKFMAHDENNVCNMGDRVRLDPSRPLSKHKHWVVAEILKKARIYVPPSTPMTDNPSSSSEAPAS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1971 124 Pfam Ribosomal protein S17 29 96 IPR000266 GO:0003735|GO:0005840|GO:0006412
Glsi06g1971 124 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 23 103 IPR000266 GO:0003735|GO:0005840|GO:0006412
Glsi06g1971 124 Gene3D - 23 118 IPR012340 -
Glsi06g1971 124 PRINTS Ribosomal protein S17 family signature 85 92 IPR000266 GO:0003735|GO:0005840|GO:0006412
Glsi06g1971 124 PRINTS Ribosomal protein S17 family signature 43 66 IPR000266 GO:0003735|GO:0005840|GO:0006412
Glsi06g1971 124 PRINTS Ribosomal protein S17 family signature 75 85 IPR000266 GO:0003735|GO:0005840|GO:0006412
Glsi06g1971 124 FunFam 30S ribosomal protein S17 24 123 - -
Glsi06g1971 124 NCBIfam 30S ribosomal protein S17 25 94 IPR019984 GO:0003735|GO:0005840|GO:0006412
Glsi06g1971 124 Hamap 30S ribosomal protein S17 [rpsQ]. 24 99 IPR019984 GO:0003735|GO:0005840|GO:0006412
Glsi06g1971 124 SUPERFAMILY Nucleic acid-binding proteins 24 111 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1971 29 98 Cytoplasmic Ribosomal Protein Gene Family AT4G30800 38.028 7.49e-06 41.2