Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1968 ATGGGATCGTCAGACTACTGCAGTTTCTGTCTGATTCCTTTGGTTCATGCATATTTTGCGGAACACTTTAGTGTCGTGATTGGTAAAGAAAAAAGACAGAAGAGGAAGAAAACTATGGCTGAGAAAATGAGGAAAGGATGCATCAAAACTAGTAAAGGGCCGTGGATAGTTCACCGCTACACTAAAAATGGCTTTGTTACCGGACATCGGTTTCCAACTGAGCATGAGAGACAAAATAATAAGCAAAGAGAGCGAAAGCGCCGAGCAGTAACCCGAAAGATTTTTGCTGGTCTTAGGGCACATGGAAACTACAATCTTCCTAAACATTCTGACACTAATGACTTGCTTAAGGCATTGTGTGAAGAAGCTGGCTGGCATGTTGAAGAAGATGGCACCATCTCTAAAAAGGAAATTGGTTTAGAAATGTCAAACTTGACTAACAAAAGATCTCAACAGCATTCAATTGATATTGATTTGGAAGAGGATGGCTATTACCAATGCATTAATGAAATGAAATTCCCCGAGGAAGAAGGAACTCCTTCAAGGATAAATTGGTTGGCGAAAGAGTATAATCATAATGTTAATCTTAAACTATCCCTTTAA 603 0.3914 MGSSDYCSFCLIPLVHAYFAEHFSVVIGKEKRQKRKKTMAEKMRKGCIKTSKGPWIVHRYTKNGFVTGHRFPTEHERQNNKQRERKRRAVTRKIFAGLRAHGNYNLPKHSDTNDLLKALCEEAGWHVEEDGTISKKEIGLEMSNLTNKRSQQHSIDIDLEEDGYYQCINEMKFPEEEGTPSRINWLAKEYNHNVNLKLSL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1968 200 MobiDBLite consensus disorder prediction 67 87 - -
Glsi06g1968 200 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 67 149 IPR033264 GO:0003700|GO:0006351|GO:0009742
Glsi06g1968 200 MobiDBLite consensus disorder prediction 69 83 - -
Glsi06g1968 200 Pfam BES1/BZR1 plant transcription factor, N-terminal 68 138 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1968 Glsi-ChrGlsi06 66992417 66994222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1968 89 136 BZR Transcription Factor Family AT1G19350 70.833 1.22e-17 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Glsi06g1968 BES1_N 2.4e-34 No_clan