Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1945 ATGAGTTGGGGCGAACCATTGGGAAAGGTTCCTTCACCAAGGTTAAATTTGCCAAAAACAAAGACGGGGGAGGGTGTGGCTATTAAAGTGATGGCTAAGAGCACCATTCTTAAGCACGAAATGGTTGAACAGCTTGAGAATCTTCTTCTTGATGCTTTTGGGAATTTTAAGGTTTCTGACTTTGGACTGAGTGCAGGTAAGAATGTACCTATACTGGGTGTTGGCCTCCTTCACACCGTCTGTGGAACCCCAAATTATGTTGCTCCTGAGAGAAGAGTCATGATGGGGGGTTGGAGAAAGTGGTGGGGGAGGATTCAAATTGAAGACAAGGCTTATGGGGAAGTTGGGCATGTCTCTTCGTCTTGGTTTTATGCTATGTGA 381 0.4541 MSWGEPLGKVPSPRLNLPKTKTGEGVAIKVMAKSTILKHEMVEQLENLLLDAFGNFKVSDFGLSAGKNVPILGVGLLHTVCGTPNYVAPERRVMMGGWRKWWGRIQIEDKAYGEVGHVSSSWFYAM 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1945 126 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 45 90 - -
Glsi06g1945 126 SUPERFAMILY Protein kinase-like (PK-like) 45 96 IPR011009 -
Glsi06g1945 126 Gene3D Transferase(Phosphotransferase) domain 1 44 100 - -
Glsi06g1945 126 ProSiteProfiles Protein kinase domain profile. 1 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1945 Glsi-ChrGlsi06 66782235 66783766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1945 46 90 CBL-interacting serine-threonine protein kinases AT2G26980 68.889 4.01e-14 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Glsi06g1945 None None None