Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi06g1940 | ATGCACATTCCAAATGAACTAATATGCTGTCTGCTTGAGGAGCATAAAATAAAAATCATCTTCGCAGAGAGAGACAGAGATAGTGAGAAAGAGAGAAAGAAGAAGAACCTGCCTCGGTTGTATGAGATCCAGAGTATGAGCACTGAAACGAAAGAATTCCCTCAAGGTTTGAGGATTCTCTTGGTAGACAATGATTTCACAAGTTTAAGAATGACAGAAGAAATGTCTTTACAATGTCAATATCAAGTTACCAAGTGTTCAGAGGCTATTGTAGCTTTAAATCTTCTGCGGGAGATGAAAGGCTGTTTTGATCTGGTGCTTATAGATGTTAATATCCCAGACATGGATGGCTTTGAATTCGTCAAACGTATTCAGTTTGAAATGAATCTTCCTGTCATTATTATGTCTTCGGATGATAGAACAAGTGCCGTAATGAAGGCACTGAAAAATGGTGCTTGTGATTATTTGATTAAGCCGGTACGCCAGGAAGTACTGAGAAATATATGGCAGCATGTTTGGAAGAGGAAGTTGAATGAAAACAAAGAACATGAAAATTCTGGGTGTTTCGAAGATAATGATCGGAATCAATATACTTCTCTTCCTGATCAAAGAGAAGTAATGGTTAAACTACCCATGAAGAGAAGCATTTCAAAAGAAGATGAAGATGGTGAACTAGTGAATGATGATCCACCAGCATCAAAGAAGCCTCGCGTAGTCTGGTCAGTGGAACTGCATCAACAATTTGTCAGTGCTGTGAAAGAACTCGGTCTTGATAAGGCTGTGCCAAAGAGGATTCTTGAATTGATGAATATCCCTGGTTTGACAAGAGAAAATGTTGCAAGTCATTTGCAGAAATATAGGCTTTATTTAAAGAGACAGGTAAGTGAAGAAGACCACCACCAACAGAATGGGATGTCAAACACAATCGGTTATGTAGAATCCAAGCTTGGTGGGCTTGGAAGCGTAGATATTGAAGTTTTGGCTGCTGCTGGCCAAGTTTCTCCTCAGACACTAGCATTGCAAACAGTGGACCAGGCTTCCCTTCTTCATGCATCGATACAGCGTCCCAACAATTTTCCTCACTCCATCGTAACCCTAGACGATGCTCATTCGGGATTAGAAGCATGGTCACATTCTAATGCAATTGGTTCCGTGGGACCCAATGGTAATCTTGGAGAGATCGGTGTTCACAACAAAAACATTCTATTAAATATATTACACCAACAGCGCCTTCACCAGCAAAAACAGCAACAATTGCTATTACATAATCAAAGTCATTCCTTCAATACTGTTCAACCATCTTGCCTACTGGTCCCCTCTCAATCTACAGGCACTTTCCTGGCAGGAAATAGTTCTGTTTCCGTCAACCATAGTAGCAGCTATGGTAGGGCTAATGCTCCTATTGATAGTAGTAGTTTCTTCGCACCTCAATCAAATGATTCTTCGTCGAGTATTTCTCGATGTGCTGGTGGCAATGGGTATAGATCTCTAGGCACTATTTCTCCATCAACATCACTACCTTCTTGTTCAAGCCAGCAGCTTCATAACTCAACTTTGACTTATTATTCCGCAAGACCCTTGCAAAGTCTTGCACCTAATCACTCTGATACACAAGGTCCTTATGGAACTCAATCTGGTGACGCACTTGAACAAGCAGCTATTAAGAATCTTGGATTTGTTGGTAAAGGAACCTGCATTCCAAGCAGTTTTTCTGCACTTGAAATTGAATCATCTATAAATGACTTAAGTCAAGGACAAATCTCTGTAGATAGCAATGGAAACACAGTGAATGAGCCAAATATCGATTTGGTAGATAATCCAGAAGTGGGCATCCCAGTCTTACAAAGATATTCATCTCTTTATCACATGACCATGGCTAGCACTGAACCTGAGCACCGAGAAGACGAAGACACCGGAGCTCAAGTGGCTCCGATCGTCAAACTCGATGGGGTTTCAGTCACCACCGGCGAGGAAGATGAAGACCCTATTTTTGATCTGAAAGCGAAGCTCTACCGATTTCATAAGGAAGGGAATCAGTGGAAGGAGAGAGGCGCTGGCAATGTAAAGCTTTTGAAACACAAGGAAAATGGAAAGATTAGGCTGGTTATGCGACAATCGAAGACTCTCAAGATCTGTGCAAACCATCTAGTTCAAGCTACAACAACAGTGCAAGAACATGCAGGAAATGATAAATCATGCCTTTGGCATGCATCTGATTTTGCGGATGGGGAATTGAAGAATGAACTATTCTGTATTAGATTCCCCTCTATTGAGAACTGTAAAACCTTCATGACAACAATGCAAGAGGTTGCTGAATCACAAGGAAGGGAGGAGGAAAATAAAGATGCTTCAGATACTGCAGTACTACTTGAGAAACTAACTGTTGGGGATAATAAAACAAAGGAGAAAGAGCAGGAAAAAGTCATTGTAACTGACAAGGAAGATAAGCAAGCTGTAGTCATGTCTTCTGATGATAGAACAAGTGCTGTAATGAAGGCACTAAGAAGTGGTGCTTATGATTATTTGATTAAGCCGGTACACCAGGAAGTACTGAGAAATATATGGCAGCATGCTTGGAGGAGAAAGTTGAATGAAAACAAAGAGCATGAAAATTCTGGGTGTTTGGAAGATAATTATCGGAATCAATATACTTCTCTTCTTTATCCAAGAGAAGTAATAGTTAAACCACCCATGAAGAGAAGCAGTTCAAAAGAAGATGAAGATGGTGAACTGGTGAATGATGATCCACCAGCATCAAAGAAGCCCCGTGTAGTCTGGTCAGTGGAATCGCATCAACAGTTTGTCAGTGCTGTGAAGGAACTTGGTTTTGATAAGGCTGTGCCAAAGAGGATTCATGAATTGATGAATATCCCTGGTTTGACAAAAGAAAATGTTGCAAGTCATTTGCAGAAATACAAGCTTTATTTAAAGAGGCAGGTAAGTGAAGAAGACCACCACCAACAGAATGGGATGTCAAACACAATCGGTTATGTGGAATCCAAGCTTGGTGGGCTAGGAAGGGTAGATATTGAAGCTTTGGCCGCTGCTGGCCAAGTTCCTCCTCAAACACTAGGAGTGCAGACAATGGAACATGCTTCCCTTTTTCATGCATCGATACAGCATCCCAAGAATTTTCCTCACTCCATCTTAACTGTAGATGATGCACCTTCAGGATTAGGAGCATGGTCACATTCTAACACAATTGGTTCCATGGGACCCAATGGTAATCTTGGAGAGATCGGTGTTCGCAACAAAAACATTCTATTAAATATATTACACCAACAGCGTCTTCACCAGCAGAAACAACAACAGCAACAGTTGCTAATACATAATCAAAGTCATTCACTCAATACTGTTCAACCATCTTGCTTACTGGTCCCCTTTCAATCTACAGGCACTTTCCAGGCAGGATTAGGAGTGCAAACAGTGGAACATGCTTCCCTTCATGCATCGATACACCATCCCAAGAATTTTCCTCACTCCATCTTAACTGTAGATGATGCACCTTCAAGATTAGGAGCATGGTCACATTCTAACGATTGGTTCCGTGGGACCCAATGGACTAATGTTCCTATTGATAGTAGTAGTCTCTTTGCACCTCAATCATATAATTCGTCGTCAAGTATTTCTCAATGTGCTGGTGGCAATGGGTATAGATCTCTAGGCACTATTTCTCCATCAACGTCACTACCTTCTTGTTCAATCCACCAGCTTCATAACTCAACTTTGACTTACTGTTCTGCAAGACCCTTGCAAAGTCTTGCACCTAATGAGTCTGACACACAAGGTTCTTATGGAACTAAATCTGGTGACGCACTTGAACAAGCAGCTGTTAAGAATCCTGGATTTGTTGGTAAAGGAACCTGCATTTCAAGCAGTTTTTCTGCACTTGAAATTGAATCATCTATAAATGACTTAAGTGACGGACAAATCTCTGTAGATAGTAATGACTGTAAAACCTTCATGACAACAATGCAAGAGGTTGTTGAATCACAAGGAAGGGAGGAGGAAAATAAAGATGCTTCAGATACTGCAGTACTACTTGAAAAACTAACTGTTGGGGATAATAAATCAGAGGAGAAAGAGCAGGAAAAAGTCACCGTAACTGACAAGGAAGATAAGCAAGCTGTAGACGGGTATGGAGATGTAATTAACTGTTTACTGGTTTTAAATCTTGTTTTGATCTGATCTACATTTAGAAATCTACTCCAGAGCGCAATTAGGATTTATTTCCGTTTTGTGGTGCCTATTCACTGCGGTGTTTTTGCAAATTATCCTTCAATTGGCTACTTTGCTGGGCTTCCAAAGATGTATGGATGGCTTAATAAAGGGAATGCCCAAAGTTGGATGTGA | 4353 | 0.4082 | MHIPNELICCLLEEHKIKIIFAERDRDSEKERKKKNLPRLYEIQSMSTETKEFPQGLRILLVDNDFTSLRMTEEMSLQCQYQVTKCSEAIVALNLLREMKGCFDLVLIDVNIPDMDGFEFVKRIQFEMNLPVIIMSSDDRTSAVMKALKNGACDYLIKPVRQEVLRNIWQHVWKRKLNENKEHENSGCFEDNDRNQYTSLPDQREVMVKLPMKRSISKEDEDGELVNDDPPASKKPRVVWSVELHQQFVSAVKELGLDKAVPKRILELMNIPGLTRENVASHLQKYRLYLKRQVSEEDHHQQNGMSNTIGYVESKLGGLGSVDIEVLAAAGQVSPQTLALQTVDQASLLHASIQRPNNFPHSIVTLDDAHSGLEAWSHSNAIGSVGPNGNLGEIGVHNKNILLNILHQQRLHQQKQQQLLLHNQSHSFNTVQPSCLLVPSQSTGTFLAGNSSVSVNHSSSYGRANAPIDSSSFFAPQSNDSSSSISRCAGGNGYRSLGTISPSTSLPSCSSQQLHNSTLTYYSARPLQSLAPNHSDTQGPYGTQSGDALEQAAIKNLGFVGKGTCIPSSFSALEIESSINDLSQGQISVDSNGNTVNEPNIDLVDNPEVGIPVLQRYSSLYHMTMASTEPEHREDEDTGAQVAPIVKLDGVSVTTGEEDEDPIFDLKAKLYRFHKEGNQWKERGAGNVKLLKHKENGKIRLVMRQSKTLKICANHLVQATTTVQEHAGNDKSCLWHASDFADGELKNELFCIRFPSIENCKTFMTTMQEVAESQGREEENKDASDTAVLLEKLTVGDNKTKEKEQEKVIVTDKEDKQAVVMSSDDRTSAVMKALRSGAYDYLIKPVHQEVLRNIWQHAWRRKLNENKEHENSGCLEDNYRNQYTSLLYPREVIVKPPMKRSSSKEDEDGELVNDDPPASKKPRVVWSVESHQQFVSAVKELGFDKAVPKRIHELMNIPGLTKENVASHLQKYKLYLKRQVSEEDHHQQNGMSNTIGYVESKLGGLGRVDIEALAAAGQVPPQTLGVQTMEHASLFHASIQHPKNFPHSILTVDDAPSGLGAWSHSNTIGSMGPNGNLGEIGVRNKNILLNILHQQRLHQQKQQQQQLLIHNQSHSLNTVQPSCLLVPFQSTGTFQAGLGVQTVEHASLHASIHHPKNFPHSILTVDDAPSRLGAWSHSNDWFRGTQWTNVPIDSSSLFAPQSYNSSSSISQCAGGNGYRSLGTISPSTSLPSCSIHQLHNSTLTYCSARPLQSLAPNESDTQGSYGTKSGDALEQAAVKNPGFVGKGTCISSSFSALEIESSINDLSDGQISVDSNDCKTFMTTMQEVVESQGREEENKDASDTAVLLEKLTVGDNKSEEKEQEKVTVTDKEDKQAVDGYGDVINCLLVLNLVLIXSTFRNLLQSAIRIYFRFVVPIHCGVFANYPSIGYFAGLPKMYGWLNKGNAQSWM | 1450 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi06g1940 | 1450 | ProSiteProfiles | Response regulatory domain profile. | 58 | 173 | IPR001789 | GO:0000160 | |
Glsi06g1940 | 1450 | Gene3D | - | 232 | 293 | - | - | |
Glsi06g1940 | 1450 | Gene3D | - | 918 | 979 | - | - | |
Glsi06g1940 | 1450 | FunFam | Two-component response regulator | 917 | 979 | - | - | |
Glsi06g1940 | 1450 | ProSiteProfiles | Ran binding domain type 1 profile. | 641 | 776 | IPR000156 | GO:0046907 | |
Glsi06g1940 | 1450 | SUPERFAMILY | CheY-like | 55 | 184 | IPR011006 | - | |
Glsi06g1940 | 1450 | SUPERFAMILY | PH domain-like | 644 | 771 | - | - | |
Glsi06g1940 | 1450 | MobiDBLite | consensus disorder prediction | 897 | 917 | - | - | |
Glsi06g1940 | 1450 | SUPERFAMILY | Homeodomain-like | 233 | 292 | IPR009057 | - | |
Glsi06g1940 | 1450 | Pfam | Response regulator receiver domain | 59 | 167 | IPR001789 | GO:0000160 | |
Glsi06g1940 | 1450 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 57 | 404 | IPR045279 | GO:0009736 | |
Glsi06g1940 | 1450 | Gene3D | - | 627 | 789 | IPR011993 | - | |
Glsi06g1940 | 1450 | SMART | ranbd_3 | 642 | 770 | IPR000156 | GO:0046907 | |
Glsi06g1940 | 1450 | FunFam | Ran-binding protein 1 b | 625 | 788 | - | - | |
Glsi06g1940 | 1450 | SMART | REC_2 | 57 | 169 | IPR001789 | GO:0000160 | |
Glsi06g1940 | 1450 | FunFam | Two-component response regulator | 231 | 293 | - | - | |
Glsi06g1940 | 1450 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 232 | 291 | IPR017930 | - | |
Glsi06g1940 | 1450 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 235 | 288 | IPR006447 | GO:0003677 | |
Glsi06g1940 | 1450 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 921 | 974 | IPR006447 | GO:0003677 | |
Glsi06g1940 | 1450 | Coils | Coil | 12 | 32 | - | - | |
Glsi06g1940 | 1450 | CDD | REC_typeB_ARR-like | 59 | 173 | - | - | |
Glsi06g1940 | 1450 | Pfam | RanBP1 domain | 653 | 770 | IPR000156 | GO:0046907 | |
Glsi06g1940 | 1450 | Pfam | Myb-like DNA-binding domain | 923 | 973 | IPR001005 | - | |
Glsi06g1940 | 1450 | Pfam | Myb-like DNA-binding domain | 237 | 287 | IPR001005 | - | |
Glsi06g1940 | 1450 | SUPERFAMILY | Homeodomain-like | 919 | 978 | IPR009057 | - | |
Glsi06g1940 | 1450 | CDD | RanBD_RanBP1 | 639 | 772 | IPR045256 | GO:0006913 | |
Glsi06g1940 | 1450 | MobiDBLite | consensus disorder prediction | 894 | 922 | - | - | |
Glsi06g1940 | 1450 | Gene3D | - | 57 | 228 | - | - | |
Glsi06g1940 | 1450 | Gene3D | - | 801 | 890 | - | - | |
Glsi06g1940 | 1450 | SUPERFAMILY | CheY-like | 817 | 871 | IPR011006 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi06g1940 | Glsi-ChrGlsi06 | 66577378 | 66594838 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi06g1940 | 757 | 978 | Response Regulator Gene Family | AT2G25180 | 36.161 | 6.43e-31 | 128 |