Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1913 ATGGCAGAAATTGCAGATGGGAGCCATTTGTTGAACTTCAACCCAAGTGAGACAAGGGGGAAGACCATTACTTGCAAAGCTGCTGTGGTATATGGTCCGGGAGAGCCATTAGTGGTGGAACAAGTTCTTGTTCATCCTCCTCAGAGAACGGAGGTCCGAATCAAGATCCTCTTCACTTCTGTCTGTCATTCCGATATCAACGGTTGGAAAGCCGAGATTGAATCTTGGCGATCTTTTCCTCGGATTTTAGGCCACGAAGCTTCCGGGATTGTGGAGAGTGTGGGAGAAGGAGTGAGCGACGTAAAAGAAGGGGATTTTGTAGTGCCTCTATTCAACGGGGAGTGCGGGGAGTGCGGCTTGTGCAAGTGCGAGAAAACCAACATGTGCGAGAAGTTCGGGGCGGACGGCGTGAGGAAGGTGATGGTCAGCGACGGAAAGAGCAGGTTCGCCACCGCAGACGGAAGCAAACCGATCTTCCATTTCCTGGGCACCTCCACCTTCGCGGAGTATACGGTTGTGGACTCAGCCTGCGTCGTCAAGCTTCCCTCCACCGCCACGGCCGGCGATTATCCAATACACCTCATCAGAAAGCTCACCTTGCTCAGTTGCGGCGTGTCCACGGGAGTTGGAGCTGCATGGAATACCGCAAATGTGCACTCTGGTTCAACCGTGGCCGTCTTCGGTTTAGGCTCTGTGGGCCTCGCTGTTGCAGAAGGAGCAAGAGCAAGAGGTGCAACCAAAATAATTGGCGTTGACGTCAACCCTGACAAGTTCGTCAAAGGCCGAGCCATGGGGATCACAGACTTCATAAATCCAAAGGACGAGGAGAAGCCAGTATCTGAGAGAATAAAGGAAATGACGGGAGGTGGTGCCCACTACAGCTTTGAGTGTTGCGGAAACTTGGACGTTCTCCGGCAAGCTTTTTTGTCTGTTCATGAGGGTTGGGGATTGGCTGTACTGGTGGGAATTCATACATCGCCAAATATGCTTCCCATCCACCCAATGGAGCTGTTTCTGGGTCGGAGGATAGTGGGTTCCATGTTTGGAGGCTTCAAAGGGAAGACCCAACTCCCTCAATTTGCCAAAGATTGCATCGATGGGGTGGTGAAGCTGGATGAGTTCATAACCCACGAGCTCCCATTTGAGAAGATAAACGAAGCCTTTGATCTTTTGATTGCGGGAAAGTCACTAAGATGTCTTCTGCACCTCTGA 1212 0.5165 MAEIADGSHLLNFNPSETRGKTITCKAAVVYGPGEPLVVEQVLVHPPQRTEVRIKILFTSVCHSDINGWKAEIESWRSFPRILGHEASGIVESVGEGVSDVKEGDFVVPLFNGECGECGLCKCEKTNMCEKFGADGVRKVMVSDGKSRFATADGSKPIFHFLGTSTFAEYTVVDSACVVKLPSTATAGDYPIHLIRKLTLLSCGVSTGVGAAWNTANVHSGSTVAVFGLGSVGLAVAEGARARGATKIIGVDVNPDKFVKGRAMGITDFINPKDEEKPVSERIKEMTGGGAHYSFECCGNLDVLRQAFLSVHEGWGLAVLVGIHTSPNMLPIHPMELFLGRRIVGSMFGGFKGKTQLPQFAKDCIDGVVKLDEFITHELPFEKINEAFDLLIAGKSLRCLLHL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1913 403 FunFam S-(hydroxymethyl)glutathione dehydrogenase 208 346 - -
Glsi06g1913 403 SUPERFAMILY GroES-like 18 187 IPR011032 -
Glsi06g1913 403 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 198 366 IPR036291 -
Glsi06g1913 403 Pfam Zinc-binding dehydrogenase 232 351 IPR013149 -
Glsi06g1913 403 Gene3D - 208 346 - -
Glsi06g1913 403 PANTHER ALCOHOL DEHYDROGENASE 20 400 - -
Glsi06g1913 403 FunFam Alcohol dehydrogenase 6 28 220 - -
Glsi06g1913 403 Gene3D - 28 398 - -
Glsi06g1913 403 SUPERFAMILY GroES-like 353 402 IPR011032 -
Glsi06g1913 403 Pfam Alcohol dehydrogenase GroES-like domain 50 180 IPR013154 -
Glsi06g1913 403 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 84 98 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1913 Glsi-ChrGlsi06 66303343 66310411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1913 50 392 Monolignol Biosynthesis Gene Families AT2G21890 27.171 9.24e-13 67.4