Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1895 ATGGAGGTGGGAAAACTCACAATCTTGTCATCAACACCACAATCAATGTTAAGATGTTTAGCTAAAAGGTTTTGGAAATTTACTGGTCTTGGCTTCAAGTCTCCCCGCGAAGCCATTGAAGTCAATTCTGATGCTGAGGAAGATGAGGACGATGCTGATGAAGCTGAAGATGACTTCGTTTCTGAATCAAAGACGGAAGCGAGCGAAGACAGTGCTGCATCCAGGACACATACCATGCAAAACAATCCTGCCTTTACGATTGCTGGAGTTGGATCAAATCTGCACTTCCAAAGAGATGAGCTACTATTGTGTAAACTCCATGTCCCTGGCAATACAAATCCTTACTAGGTGGGACGCCTACTTTGCCTGCAGCATCTAAACATCAGCTATAATAACTTTGCTGGGAGTATTCCAAGCAATCTAAGTCACTGTAAAGACCTGAGAATATTATCTGCAGGTAATAACAATTTTACAGGAGCAATCCCAACTTGGATAGGGAATTTTTCTGCTTTATCTCTTCTCAACTTGGCCGAGAACAATTTGCATGGAAGCATACCAAATGAGGTAGGCCATTTATCAGGCTTGACACTTCTTGGACTAAATGGGAATTACCTATCTGGTAAAGTTCCTTCTTCAATTTATAACATTTCTTCCTTGTTCTTTTTCCATTTTTCTCAAAACCATCTGCACGGTAATTTACCAGCTGATGTTGGCTTTACTCTTCCTAACCTTCAAGTATTTGCCGGTTCAGTCAACAATTTCACAGGAACTGTTCCTGCATCATTGTTAAATGCTTCAAGGCTACGAATTCTTGACTTTGCTAATAATAGTCTCACTGGAACACTGCCAAAGGACATAGGAATCTTGAACAGTTTAACTAGACTTAATTTCGATGTCAATGGACTTGGAACTGGGAAATCTGACGATCTAAACTTTTTTGCTTCCTTGGTTAACTGCACTGATCTAGAAGTTTTAGGTCTTGCAGTAAATAATTTTGGTGGAGAATTGCCCAGCCTAATTGCTAATTTATCTAGCCAATTAAGAAGATTAACCTTAGGTTCCAATGCATTATATGGAAGCATCCCTGTTGGAATTGGCAAACATGCTAACTTGGCCCTTCTTGGATTGGAAGACAACCTTCTAAGTGGTAGTGTCCCTGATGAAATAGGCATGCTCCAAAATTTGGAAGGTTTGGATTTGAAGATCAACAACTTTTCTGGAGCAATCCCTTCCTCTCTGGGAAACTTAACTTCATTAACAAGCCTCTACATGGAGGAGAACAACTTTGAGGGGAGTATACCTTCAAGTATTGGAAAATGTCAGAATTTGTTAGTGCTGAGTCTTTATATTAACAAGCTCAATGGCACCATACCAAAGGAAGTGATTGGCCTTTCTTCACTTGCAGGGTACTTCGATGTGTCTTATAATGTTCTGACAGGGTCCATACCTGATGAAGTGGGCAAATTAGATAATCTAGCAGAGTTGGTACTCTCACAGAACAAATTGTCTGGCGTTATTCCATCTTCTCTTGGCAAATGTGTCATCCTGGAACGACTGTATTTACAGGCCCATGTTGGGGACTTCGGATTAGCAACCCTTCTATATGAAGAATCAAGTCTGTCTTCTAGTTCCAAACAATCAACAATATCAGCAAACCTAAAGGGTTCCATTGGGTACATTCCATCAGAGTATGGCATGGGTGCTCAACCTTCAACTCATGGAGATGTCTTCAGCTATGGGATACTGTTACTGGAAATTTTCACTGGAAAAAGACCAACAGATGAGGCATTTGAAGATGGGATGGGAATTCACCAGTTTGCAGCAATGGCTTTACCTAATCATGCCATGGATATAGTTGACCCTTCACTGCTGTCTGAAGAAGAATTTGATGATGATGGAGATCAAGAAATTTACTCACAGGAGAGAGCAATAAGGAAGGGAAGAAGACGTGAAATCCAGGCAAGACATACAATGGAGGATTGCTTGGCTTCGTTGATGCAAATCGGAGTCTCATGCTCTGATACTTGGCCCACGGAGCGGCTGCCTATGACTGTGGTTGTCAACAAACTGCAAGCAATCAAGAGCGTGTACATGAGAAAGCTGAGGAAGATGAGGACGATGCTGATGAAGCTAGCTGAAGATGACTTTGATTCTGAATCAAAGACGGATGCTAGCGAAGACAGTGCTTCATGCACAACGTAG 2202 0.4146 MEVGKLTILSSTPQSMLRCLAKRFWKFTGLGFKSPREAIEVNSDAEEDEDDADEAEDDFVSESKTEASEDSAASRTHTMQNNPAFTIAGVGSNLHFQRDELLLCKLHVPGNTNPYXVGRLLCLQHLNISYNNFAGSIPSNLSHCKDLRILSAGNNNFTGAIPTWIGNFSALSLLNLAENNLHGSIPNEVGHLSGLTLLGLNGNYLSGKVPSSIYNISSLFFFHFSQNHLHGNLPADVGFTLPNLQVFAGSVNNFTGTVPASLLNASRLRILDFANNSLTGTLPKDIGILNSLTRLNFDVNGLGTGKSDDLNFFASLVNCTDLEVLGLAVNNFGGELPSLIANLSSQLRRLTLGSNALYGSIPVGIGKHANLALLGLEDNLLSGSVPDEIGMLQNLEGLDLKINNFSGAIPSSLGNLTSLTSLYMEENNFEGSIPSSIGKCQNLLVLSLYINKLNGTIPKEVIGLSSLAGYFDVSYNVLTGSIPDEVGKLDNLAELVLSQNKLSGVIPSSLGKCVILERLYLQAHVGDFGLATLLYEESSLSSSSKQSTISANLKGSIGYIPSEYGMGAQPSTHGDVFSYGILLLEIFTGKRPTDEAFEDGMGIHQFAAMALPNHAMDIVDPSLLSEEEFDDDGDQEIYSQERAIRKGRRREIQARHTMEDCLASLMQIGVSCSDTWPTERLPMTVVVNKLQAIKSVYMRKLRKMRTMLMKLAEDDFDSESKTDASEDSASCTT 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1895 733 ProSiteProfiles Protein kinase domain profile. 347 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1895 733 SUPERFAMILY Protein kinase-like (PK-like) 522 705 IPR011009 -
Glsi06g1895 733 Gene3D Ribonuclease Inhibitor 310 520 IPR032675 -
Glsi06g1895 733 Gene3D Ribonuclease Inhibitor 110 309 IPR032675 -
Glsi06g1895 733 Pfam Protein tyrosine and serine/threonine kinase 522 596 IPR001245 GO:0004672|GO:0006468
Glsi06g1895 733 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 99 316 - -
Glsi06g1895 733 MobiDBLite consensus disorder prediction 38 79 - -
Glsi06g1895 733 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 317 525 - -
Glsi06g1895 733 MobiDBLite consensus disorder prediction 42 60 - -
Glsi06g1895 733 SUPERFAMILY RNI-like 239 522 - -
Glsi06g1895 733 Gene3D Transferase(Phosphotransferase) domain 1 521 631 - -
Glsi06g1895 733 SUPERFAMILY L domain-like 112 304 - -
Glsi06g1895 733 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 521 680 - -
Glsi06g1895 733 Coils Coil 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1895 Glsi-ChrGlsi06 66135576 66148164 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1895 521 698 Receptor kinase-like Gene Family AT5G20480 35.359 9.03e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Glsi06g1895 PK_Tyr_Ser-Thr 2.6e-07 CL0016