Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1878 ATGCCTTCCTCCTCTACCACCATCATCTCCAAATGCCCTGTCTACCCACACCAAAATTCCACTCTCAAAACCCTCAAGCTCTCTGTCTCTGACCTCCCTATGCTCTCCTGCCATTACATCCAAAAGGGTATACTCCTCCCTCCCCCGCCCTTCTCCATCCATGACCTCCTCCTCTTCCTCAAAAGCTCCCTCTCCGTCGCTCTCACCCACTTCCCCGCCCTCGCCGGCCGCCTCTTCACAGACTCCGACGGCCACGTCCACATAGTCTGCAACGACGCCGGCGTGGACTTCATCCACGCCAAGGCCAAACACCTCGCGACGACCTCTATTTACAGCTCTCCGAATGTCGTCGACGTTCCCAATTGTTTCAAGGAGTTCTTTGCTTACAATAAGACTATATCTTACTCCGGCCACCACCTCCCCCTAACCGCTGTTCAAGTCACCGAGCTAGCCGACGCAGTTTTTATCGGCTGCACCGTCAACCACGCCGTCACTGACGGGACTTCGTTCTGGCATTTCTTCAACACCTTCGCTGAGATCTGCAAAGGAGCGAAGAAGATATCCAAGTTGCCGGACTTCACCCGCGACACCGTTTTCAACTCCGCCGCCGTGCTGAGAGTCCCGGCCGGCGGCCCCAAGGTCACCTTCGCCGACGAAGAGCCGTTGCGGGAACGAGTGTTCCATTTCAGCAGAGAAGCAATTCAGAAACTGAAGCTCAGAGCTAATGGCGCGAACGGTTTCGCGGAGGTAGTTGGTAAGCAAGTAAACGGCAGTTGGAAATATCGTCGTTTAGCGGAGAACAAGATAACAGCCACGAAGGAAGAGATATCGTCGTTTCAATCATTATCCGCTCAATTGTGGCGTTCGGTGACACGTGCGAGGAAGTTGGACCAGTCAAAAAAGTCGACGTTCCGGATGGCCGTGAACTGCCGCCACCGTGTGCGGCCGAAGATGGACGCTTATTACTTCGGCAACGCGATACAGAGCATCCCGACCTTTGCTCAAGTCGGGGAGTTACTGTCTCGGGATCTACACTGGTGTGCGGATCTGCTCCACCAAAACGTCGTCGCACACGACGACGCTACGGTGCGACGGGGCGTAGAAGATTGGGAGAAGGCGCCGAGGTTGTTCCCTCTGGGGAACTTCGACGGTGCATCAATGACCATGGGTAGCTCTCCGCGTTTCCCCATGTACAACAATGACTTCGGGTGGGGCCAACCCTTGGCGATTCGGAGTGGAAAGGCAAACAAGTTTGACGGTAAGATCTCGGCGTTTCCAGGTAGAGAAGGGAACGGGAGCGTTGATCTAGAGGTCGTTTTGGCGCCTCAAACGATGGAGGGGCTTGAAAACGACATGGAGTTCATGCAGTACGTAACGCCAGTGGTGTGA 1389 0.5508 MPSSSTTIISKCPVYPHQNSTLKTLKLSVSDLPMLSCHYIQKGILLPPPPFSIHDLLLFLKSSLSVALTHFPALAGRLFTDSDGHVHIVCNDAGVDFIHAKAKHLATTSIYSSPNVVDVPNCFKEFFAYNKTISYSGHHLPLTAVQVTELADAVFIGCTVNHAVTDGTSFWHFFNTFAEICKGAKKISKLPDFTRDTVFNSAAVLRVPAGGPKVTFADEEPLRERVFHFSREAIQKLKLRANGANGFAEVVGKQVNGSWKYRRLAENKITATKEEISSFQSLSAQLWRSVTRARKLDQSKKSTFRMAVNCRHRVRPKMDAYYFGNAIQSIPTFAQVGELLSRDLHWCADLLHQNVVAHDDATVRRGVEDWEKAPRLFPLGNFDGASMTMGSSPRFPMYNNDFGWGQPLAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPQTMEGLENDMEFMQYVTPVV 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1878 462 Gene3D - 220 455 IPR023213 -
Glsi06g1878 462 FunFam Tryptamine hydroxycinnamoyl transferase 211 453 - -
Glsi06g1878 462 Gene3D - 6 208 IPR023213 -
Glsi06g1878 462 SUPERFAMILY CoA-dependent acyltransferases 59 183 - -
Glsi06g1878 462 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 456 - -
Glsi06g1878 462 Pfam Transferase family 6 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1878 Glsi-ChrGlsi06 65894974 65896362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1878 60 449 Monolignol Biosynthesis Gene Families AT5G48930 26.161 1.78e-36 137