Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1821 ATGGCGGAGGGTTTTGAGCCTTACCATGTTCCTCAGCAAAGTAGACGAGACAAGCTCAGAGTAGTTGTTGACTCCTCTTCCCCTAACCTCCCTCCTGGGTGTGCAGGTTTACTTCCTCTGTACGACCCCTCTCTTATTTCCCACGATTTGCTAACATGCGCCCATCACCTCTCTTCAAACGACGAAGCCTCTAAATCAAACCCAGATTGCTCTGTTAAGGAAGAAGGTTCCAATTTGATGGGATTTTCTTCTTCTTCATCTTCTTCTTCAGTTTCCCATTTCTTGGATCCTGGTACAATTCAAATCATCAACAATAACCCATTTCTTTTTCCCACCCAAAACCTTCGGGAATTTGACCAGAGCTTCAATGGCAGTTCTGAAATTATGGTGTTTAAGCCAGAGGAGCCATTGTCTTTGTCTCTTTCTTCATTCCACAATAATAATACCCACCAAGCTAATTATCACCCACTTGAGCTAAATCTGCAGAGATATGGCTCTGCCATCTATGGAGGAGGAAGTGCTTCTGCTTCCAACGACGTCGTTTGGAGAAGCTCCGTTCCACTACCACTGGGGCCATTTACGGGGTACGCTTCGGTATTGAAGGGATCGAGGTTTTTAAAGCCTGCTCAGCAATTATTGGAAGAGCTTTGTGATATTGGAGGCCGTGGAATTTACGTTGAAAAAATAACGGCAGCGGAGACGACTTCGTTTATGGAACCTCCGTCGGAAAGCTTCAGCTCCGGCGATCTGCCCCCGCTCGGAGATGGCGGTGAGGGTCGTAAGAAGAAGTCAAGGCTATTAACCTTGCTTGATGAGCCAAGGGGCTATGATGTTATTAATACGTCGTCAACTACGATGCTGTGTGAGATTGATGGCATGAACGAAGTTGTTGTTATTTATGGTGATGTTTCTGACATTGTCTTTGTAGTTTATTGCAATATTCATGGCTAA 951 0.4522 MAEGFEPYHVPQQSRRDKLRVVVDSSSPNLPPGCAGLLPLYDPSLISHDLLTCAHHLSSNDEASKSNPDCSVKEEGSNLMGFSSSSSSSSVSHFLDPGTIQIINNNPFLFPTQNLREFDQSFNGSSEIMVFKPEEPLSLSLSSFHNNNTHQANYHPLELNLQRYGSAIYGGGSASASNDVVWRSSVPLPLGPFTGYASVLKGSRFLKPAQQLLEELCDIGGRGIYVEKITAAETTSFMEPPSESFSSGDLPPLGDGGEGRKKKSRLLTLLDEPRGYDVINTSSTTMLCEIDGMNEVVVIYGDVSDIVFVVYCNIHG 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1821 316 MobiDBLite consensus disorder prediction 237 260 - -
Glsi06g1821 316 Pfam Associated with HOX 199 272 IPR006563 -
Glsi06g1821 316 SMART prehox3 194 289 IPR006563 -
Glsi06g1821 316 MobiDBLite consensus disorder prediction 59 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1821 Glsi-ChrGlsi06 65275327 65276651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1821 1 229 Homeobox Transcription Factor Family AT5G02030 39.316 6.26e-23 97.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g1821 06 65275327 65276651 Glsi06g1821 06 65275327 65276651 ECH