Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1816 ATGGCTCAGGCGACAGGTCGGAGCAGTTTGGTCGGAGACTACATCGTCGGAAGGCAAATAGGGGCTGGGTCGTTCTCGGTGGTGTGGCATGGGAGGCACCGAGTCCATGGAACCGAGGTGGCCATAAAGGAGATCACCACGCTTCGGCTCAACAAGAAGTTGCAGGAGAGTCTTATGTCTGAGATTTTCATCTTGAAGCGGATTAACCATCCTAATATTATTCGTTTGCACGATATCATTGAGGTTCCTGGGAAGATACATCTTGTGTTAGAGTATTGTAAAGGGGGTGATCTCTCTTTGTATATTCAACGTCATGGAGGAGTCCCAGAGGCAACTGCAAAGTACTTTATGCAACAACTAGCTGCTGGCCTACAAATTCTTCGGGACAATAACCTTATACATAGAGATTTGAAACCACAGAATCTTCTTCTCACCAGAAATGATGACAAATCAGTACTGAAGATTGCGGATTTCGGATTTGCTAGATCTCTGCAACCTAGGGGCCTTGCAGAAACCTTGTGTGGTTCCCCACTCTACATGGCCCCAGAAATCATGCAACTACAGAAGTACGATGCTAAGGCAGATCTCTGGAGTGTGGGCACCATCTTATTTCAGCTTGTTACAGGAAGAACACCATTTACCGGAGGCAATCAAATACAGTTATTACAGAACATTGTGAAATCAACTGAATTGCAGTTCCCATCTGATAACCAAAATCTGAGTTCTGACTGTAAAGATTTATGTCAGAAATTGCTGCGCCGTAATCCAGTGGAACGGCTAACTTTTGAAGAATTCTTTAACCATCCATTTCTTTCTCAGAAGCAACCAGAACAAGATAAATCGTTCAGGAATAAAAGTTTTTCAAGGATGGTTGGTGAATTTCGCTCAACAGAACCTGATCCTTTGAGAACGACCAAGGGAAATTACCAAGAGGATTGTTTACCTTTCTTTCTTGATGATGATTCTAGTGGTCCCGAGGGGAGCCCATCTTTTTCAAGGAAGAAGTCTTCAATAAAGTCTACCTATGGATTTGACCTAAACACAAAACTAGATAAGGAAGACCCAGCATCCTCTACTAATAAAATAAATTTTACTTCCAGATATGGTAATGTAACGCAGCGACCTGAAAACAATACAAGGTTCACTGATCCTCCAGAATCTCTAGAACAGAGATTGGCAAACACTAGTTCAAAAGTTTCAGACTCACTAGAAAATATTGATCAAGATTATGTTCTCGTGTCTGGACCCCCCATGGATGTTTCATCATCTTCAGTGAGTGGATTGAAGCCAAGCCAAGAGTCTTCTAATATAATTGATAGAGTAAGTGCTCCAATGCCAATAGTTGGTGTAGCTACCAGTAGCACATGTCAAATTGGAAGTTCAGAAAGTCAGGACTCGGCTCCTAGGGTTTCACAGTCATCAATGGATACTGGAGATGAGCAGCCATCAGCTCACTGCATGACAAGGATAAAATCATTGCAACAGTGTGCATATGCAATAACTGAATTAGTTGATGAAAAGATTACTCAGGCATTTCTCTATTGGGCATCATATGTATATTATAATGAATCAACAGCTGAAGTAGTGACTCTTGATCAATTCATACATGATCTTGATCTTATATTACTTTGTGGAAACCTGTGTGGATGCTATAATGGATTTCTAGCCAGTCATAAGGCGGCTGCCTCTGCCATGGAAGGAAGTCCAAGTCAAGAAACTACAAGATGTAGGAGGAGCACCAGTGCGAAGCATGGTAGTTCTGATTCAGAAGAATGCCTTGATGGGAGCATGCAAGGGCCAAAGGATATATTATCTCAAATCGAAAGTGAATTTCTGAGAGAATTTGAGCATGCTGAAGAACTTGCTAAGGCTGTTGAGCCTGGAAATACTGAGATGCCAGATGCAATGGAAACTATATTTCAGTCTGCCCTTGCTTTTGGGAGACATGGGGGTGTAGACGAGCTCATGGGTGAAATGGAAAGTGCTGCTGCGTTATATTCAAAAGCCGTGCAACTGTTACTCTTCCTTCTTGTGGAAGCTCCATCGCTCATTCTCAACCCTCCATTTCAACTAACAAACTCAGTCCGGTACCGGCTTCGGACTTACATTGATATTCTTAATAACAGGCAAGGGGATATTGGGGATGCTAAAGTGATGGGAGTCAACGACCTCAAGCTAGGTTCTTGTAAAGTCAACATTTCTGTGATTAGAATGATGATTAAGTGTACATTTGGTGAAGGATGTGCAGATGCTTGA 2256 0.4233 MAQATGRSSLVGDYIVGRQIGAGSFSVVWHGRHRVHGTEVAIKEITTLRLNKKLQESLMSEIFILKRINHPNIIRLHDIIEVPGKIHLVLEYCKGGDLSLYIQRHGGVPEATAKYFMQQLAAGLQILRDNNLIHRDLKPQNLLLTRNDDKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGTILFQLVTGRTPFTGGNQIQLLQNIVKSTELQFPSDNQNLSSDCKDLCQKLLRRNPVERLTFEEFFNHPFLSQKQPEQDKSFRNKSFSRMVGEFRSTEPDPLRTTKGNYQEDCLPFFLDDDSSGPEGSPSFSRKKSSIKSTYGFDLNTKLDKEDPASSTNKINFTSRYGNVTQRPENNTRFTDPPESLEQRLANTSSKVSDSLENIDQDYVLVSGPPMDVSSSSVSGLKPSQESSNIIDRVSAPMPIVGVATSSTCQIGSSESQDSAPRVSQSSMDTGDEQPSAHCMTRIKSLQQCAYAITELVDEKITQAFLYWASYVYYNESTAEVVTLDQFIHDLDLILLCGNLCGCYNGFLASHKAAASAMEGSPSQETTRCRRSTSAKHGSSDSEECLDGSMQGPKDILSQIESEFLREFEHAEELAKAVEPGNTEMPDAMETIFQSALAFGRHGGVDELMGEMESAAALYSKAVQLLLFLLVEAPSLILNPPFQLTNSVRYRLRTYIDILNNRQGDIGDAKVMGVNDLKLGSCKVNISVIRMMIKCTFGEGCADA 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1816 751 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1816 751 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 4 642 IPR045269 GO:0004674|GO:0006914
Glsi06g1816 751 MobiDBLite consensus disorder prediction 314 336 - -
Glsi06g1816 751 Gene3D Transferase(Phosphotransferase) domain 1 5 311 - -
Glsi06g1816 751 MobiDBLite consensus disorder prediction 457 481 - -
Glsi06g1816 751 CDD STKc_ATG1_ULK_like 20 270 - -
Glsi06g1816 751 SUPERFAMILY Protein kinase-like (PK-like) 11 272 IPR011009 -
Glsi06g1816 751 MobiDBLite consensus disorder prediction 457 483 - -
Glsi06g1816 751 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Glsi06g1816 751 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1816 751 FunFam Aurora kinase A 7 96 - -
Glsi06g1816 751 MobiDBLite consensus disorder prediction 348 400 - -
Glsi06g1816 751 MobiDBLite consensus disorder prediction 565 598 - -
Glsi06g1816 751 MobiDBLite consensus disorder prediction 357 400 - -
Glsi06g1816 751 FunFam Serine/threonine-protein kinase ATG1 6 312 - -
Glsi06g1816 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Glsi06g1816 751 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1816 Glsi-ChrGlsi06 65221280 65229206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1816 9 280 CBL-interacting serine-threonine protein kinases AT2G30360 37.050 1.51e-54 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Glsi06g1816 Pkinase 3.9e-71 CL0016