Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1804 ATGCATAAGCAGCTTCTGTCCCTGTCTGTGGGCCCCCAATTCCACTTCTCCCCTGGACCCCAGCTGATTATCAAATCAAATTTGATTTCTTTTGGAGTCCGCAATGGAGAACGCAGAGAGAAAGAGAGAGGTGGTGGGGGCGATGGTCGCTGGCTCTTTAATACTTGTGACATTTCTTCTAAAGAACAGAGTGAGCTGGGTGCTTATAAACACTTTAATACTTGTGACATTTCTTCGGAAGTGCTTTAACACTTTAATACTTGTGACATTTCTTCTGAAGCGCTTTCTATGGTGGTATTTTTGCTCCTTGCTACAACAGGGCCACCGATCAAAAGAAGAGCAGGTTTACGGATCAAGCAAGCTGGTCGAGTTTTGGAAAACCCAACCATGGAAGCCACCACTTCTGTAACGAAGTTGTTGAAGAGCTTTTGTGATTATTCACATTGGAATTATGCTGTGTTTTGGAAGCTTAGCCACCATTTTCCAACGACTTTGACTTGGGAAGATGGATACTTTGTTGACCAGAAAACAAATGAGGCTGTGAAAAGTATGTGGAGTGACATTCCTTTCGTAGCTGTGGATGAGATGGTTTCTTCAAGCAGTGAAAGTACTAATAGTTCAGGAGAGAATTCAGTTCGACTACTCATGAGTGAAATGGCTCATCTTAAGTACATATTGGGGGAGGGGGTTGTTGGTAAAATAGCTCTCACTGGGGATCATTGTTGGGTTTTGTGCGAGGATATTTTTACCAGTAAATTCCACACTAACTTGATTCCTGAGTGTCCTTATGAATGGCTTCTTCAATTTGTGTCAGCTATCAAGACTATTGTGCTGATACCAGTTCTTCCACAAGGAGTTTTGCAATTTGGTTCATTTGAAGCGGTTGCTGAAGACCTGGCATTTGTTGCCACTATCAAGGAGAAATTCAATTCCATTCGTTGCATGGCATCAAATACTACATCTTTGTGCTCGGATATAAATTTTCAAGATTGGTCGATCTCAGCTCTAACAGATTGTCCTCTGGATAAGTCGGATGAATCATCTTCTATTACAAATAATATACTGATAGGTGAACTTTCTGGTGGTGTATCACACAATATAAATGGATCAACAAGATCAAATCCGACCGTCCCATTATTTGTTCAGGTTGAAGGTTTCGTGTCTGAGAAAAATGACATCAGTCCCCCATCAACCGCGGTGTCAAATGATATTGGTCCAGTGGAGATGAAATCACATCACATGGAAGAAGAGATGTGGACCTGTTCTTCCTGGGCCAGTAATGTGGGAGTATCCGGAGAGACATCAAAGGGAATATTTTCTTACTCTTGTAAAGATATGGTAGAACAGCAATTTGAAGGCATTGACACTGATCGTGAAGGCTGTAAGAATGTGAATAGTTTCTTCAGTTTTCCCTTGGATTCAGAATTACACAAAGCACTAGGACCTCTTGCTAACATACAGACTGCTGAATCTGAGTCAAAATATGAGGATACATACAATAGCTCGACTTTGGTAACCAATAAAAAAGAGCATGATCATATTAGGGGTTTACAATTTTCCGAGGAAGGTGATGCTGAATATATCTTGGATGCTGTTACTGGCAATTTATGCAGTAGCTCAGATGATACATCCATAACCTTGCCAATAGAATTTACTGCCTCCATTCATCCACAAAGTCATTCTGAGGAAAGCCCTTTGATAATGGATAATTCAGATCTGAGTAGCCATCTTACATCTGCATTTGTGGCCAAGGACAGAGATGATTGTACTAACCTTTTTACACTGGTGGATGGAAATTCTAGTTTATTGTTTGATGGGAAACAGAAAGATGCTGTTCATAGTCATATGCAGCCTAAGAGCGGACCAACACTTTGTAGCACCGGAAAAAAAAGAGCTAGAGTTGGTAACACACAAAGGCCAAGACCAAGGGATAGACAGTTGATAATGGACCGGATGAAAGAGCTGAGGGAACTTGTCCCAGATGGTGCCAGGTGTAGCATCAACAACCTCTTAGATCGGACCATAAAGCATGTGCTGTATTTAAGAAAAATAACAAACCAAGCTGAGAAGTTGAAACAATGTGTGCATAAGGAGACGCCTGAGTGCAATAAACAGAAAATCAATGGAAGCCATACAGGGAGGAGCTGCGCAATTGACTTTGGAAGTGAACTTCAAGTATGCCCGATAGTCATAGAAGATCTTGAATGCTCAGGCCACATGCTCATAGAGATGATATGCAATGAGCATGTAGTTTTCTTGGAGATTGCCCAAGTGATTCGTCGATTGGAGCTTACCATCTTGAAAGGTGTTTTAGAACGCCGTTCAAACACCGCCTGGGCTTGTTTCATCGTTGAGGTTCCCAAAGGTTTCCACAGAATGGATGTTTTGTGTCCTTTGTTGCATCTTTTGCAGCCTAGCAGAAATCCTGTCTTATAG 2436 0.4158 MHKQLLSLSVGPQFHFSPGPQLIIKSNLISFGVRNGERREKERGGGGDGRWLFNTCDISSKEQSELGAYKHFNTCDISSEVLXHFNTCDISSEALSMVVFLLLATTGPPIKRRAGLRIKQAGRVLENPTMEATTSVTKLLKSFCDYSHWNYAVFWKLSHHFPTTLTWEDGYFVDQKTNEAVKSMWSDIPFVAVDEMVSSSSESTNSSGENSVRLLMSEMAHLKYILGEGVVGKIALTGDHCWVLCEDIFTSKFHTNLIPECPYEWLLQFVSAIKTIVLIPVLPQGVLQFGSFEAVAEDLAFVATIKEKFNSIRCMASNTTSLCSDINFQDWSISALTDCPLDKSDESSSITNNILIGELSGGVSHNINGSTRSNPTVPLFVQVEGFVSEKNDISPPSTAVSNDIGPVEMKSHHMEEEMWTCSSWASNVGVSGETSKGIFSYSCKDMVEQQFEGIDTDREGCKNVNSFFSFPLDSELHKALGPLANIQTAESESKYEDTYNSSTLVTNKKEHDHIRGLQFSEEGDAEYILDAVTGNLCSSSDDTSITLPIEFTASIHPQSHSEESPLIMDNSDLSSHLTSAFVAKDRDDCTNLFTLVDGNSSLLFDGKQKDAVHSHMQPKSGPTLCSTGKKRARVGNTQRPRPRDRQLIMDRMKELRELVPDGARCSINNLLDRTIKHVLYLRKITNQAEKLKQCVHKETPECNKQKINGSHTGRSCAIDFGSELQVCPIVIEDLECSGHMLIEMICNEHVVFLEIAQVIRRLELTILKGVLERRSNTAWACFIVEVPKGFHRMDVLCPLLHLLQPSRNPVL 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1804 811 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 433 808 IPR043561 GO:0003700|GO:0006355
Glsi06g1804 811 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 632 681 IPR011598 GO:0046983
Glsi06g1804 811 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 138 309 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1804 Glsi-ChrGlsi06 65072661 65080512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1804 464 808 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 34.043 3.39e-47 178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g1804 06 65072661 65080512 Glsi06g1804 06 65072661 65080512 ECH