Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1791 ATGGCTAGTTTGTTCAATCTTCTCAAATTCTTCTTCTCTGTATTACCTTTTCTTTTTATCCCTGTTTCATCTCAGCCCGACCAGCTCGTGTATGCTGGATTCAAGGATGTGGGTTCCGATAATATAACCTTGAATGGAATTGCAGAAATTCAGAAAAACGGAATCCTTAAATTAACGAACGACACCAGTAGGTTAATAGGTCATGCTTTTTATCCATCTCCATTTCAGTTCAAGAACTCTACCTCTGGTAAAGCTTTCTCCTTCTCTTCCTCGTTTGCTCTGGCTATAGTCCCTGAGTACCCCGCGCTTGGTGGCCATGGCCTTGCTTTTACAATTGCCCCTTCTAAGGATCTTAAAGCTCTGCCGAGTCAGTATCTGGGTCTCCTCAATGCTAACGATATTGGGAATTTCTCCAACCATCTCTTTGCCGTTGAGTTCGACACCGTCCAAGATTTCGAGTTCCACGATATCAATGACAACCATGTCGGAATCGACATAAACAGCATGGAGTCCAATTCCTCTGTTGTCGCAGGTTATTTCGCCGACGATTCGACCAAGCAAAATCTCAGCCTCAAAAGTGGGGAACCGGTTCTTGTTTGGGTCGATTACGATTCAGCTGAAAATCTCATTAATGTCACTCTTTCTCCTTCTTCTTCCAAACCCAAGAAACCAACATTGTCTTTTTCTGTAGATCTGTCTCCTATTCTTCATGAATCTATGTACGTTGGGTTTTCTGCTGCAACGGGTTTGCTTGCTAGCTCCCATTACATCTTGGGTTGGAGCTTCAAAATCAATGGACCAGCTCCATTTCTTGACCTCTCTTCTCTCCCTCAGCTTCCAGGTCCGAAGAAGAATTACAGATCTCTGGTAATAGGAGTTTCAGTATCAGTAGCTCTAATTGGATTATCTGCCATCTTAATTGGAATTTACCTGTTCAGAAAAATCAAGAACGCTGATGTGATCGAAGCCTGGGAGCTTCAAATTGGGCCTCACAGATACTCCTACCAAGAGCTCAAGAAAGCTACCAGAAATTTCAAGGACAAAGAGCTACTTGGGCAAGGTGGATTTGGTCGAGTTTATAAAGGAACGCTACCGAATTCCAAGACCCAAGTCGCAGTTAAGCGGGTTTCTCACGAATCAAAGCAGGGTCTTCGGGAATTCGTGTCGGAAATCGCCAGCATCGGCCGGCTCCGCCACAGGAATTTGGTTCAGTTACTGGGTTGGTGTCGCCGGCGAGTGGCATGCGGGAGAAGACCCATTGAGTCTAACGCAAGGCCAGAGGAGTTAGTTTTGGTGGACTGGGTGTGGGAGAGAGCCACACCTCTTCTGTTTCATTTGAAAGGAATTGATCCATAG 1356 0.4521 MASLFNLLKFFFSVLPFLFIPVSSQPDQLVYAGFKDVGSDNITLNGIAEIQKNGILKLTNDTSRLIGHAFYPSPFQFKNSTSGKAFSFSSSFALAIVPEYPALGGHGLAFTIAPSKDLKALPSQYLGLLNANDIGNFSNHLFAVEFDTVQDFEFHDINDNHVGIDINSMESNSSVVAGYFADDSTKQNLSLKSGEPVLVWVDYDSAENLINVTLSPSSSKPKKPTLSFSVDLSPILHESMYVGFSAATGLLASSHYILGWSFKINGPAPFLDLSSLPQLPGPKKNYRSLVIGVSVSVALIGLSAILIGIYLFRKIKNADVIEAWELQIGPHRYSYQELKKATRNFKDKELLGQGGFGRVYKGTLPNSKTQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRVACGRRPIESNARPEELVLVDWVWERATPLLFHLKGIDP 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1791 451 ProSiteProfiles Protein kinase domain profile. 345 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1791 451 FunFam serine/threonine-protein kinase PBS1-like 313 414 - -
Glsi06g1791 451 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 282 IPR013320 -
Glsi06g1791 451 FunFam L-type lectin-domain containing receptor kinase S.4 25 269 - -
Glsi06g1791 451 Gene3D - 28 265 - -
Glsi06g1791 451 Pfam Legume lectin domain 29 276 IPR001220 GO:0030246
Glsi06g1791 451 PANTHER - 45 411 - -
Glsi06g1791 451 Pfam Protein tyrosine and serine/threonine kinase 348 411 IPR001245 GO:0004672|GO:0006468
Glsi06g1791 451 Gene3D Phosphorylase Kinase; domain 1 330 415 - -
Glsi06g1791 451 CDD lectin_legume_LecRK_Arcelin_ConA 28 266 IPR001220 GO:0030246
Glsi06g1791 451 SUPERFAMILY Protein kinase-like (PK-like) 317 411 IPR011009 -
Glsi06g1791 451 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1791 Glsi-ChrGlsi06 64843310 64845475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1791 390 438 Receptor kinase-like Gene Family AT3G55550 53.061 1.96e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi06g1791 Lectin_legB 4.1e-77 CL0004