Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1769 ATGATGGAGGAACCAGTAATGGCTGCTTGGTCAGAAGGGTCAGAAGATGAGCTTGTGAGAGAGCTTTTAGATGATGGGTCTCCTCTTGTTAATGTGCTACCAGAAGAGGCAATTCAGAACCATACCAGAACTTCAAGTGAACATGCCAATATTAATAGGTTCATTTCCAACATCTACTCAGGGCCTACTATTGCAGATATTGAAAGTGCACTAGTAGTAACCAACCAAAGAGAGCATTTCCAAGAACTCTCATCAGCCAGAGTTTCCATATTGGAAAGAGGTTTGAATTTGAGTAAGATTGAGAATAAGTATACCCTGAAAATCAAGTGCTTTGGCAATGGGATGGGTGATGATGGATATAAGTGGAGAAAGTATGGTCAGAAATCTATTAAGAATAGCCCAAATCCTAGGAGCTACTACAGGTGCACTAACCCAAGGTGCAGTGCCAAGAAGCAGGTAGAGAGATCCCATGAAGACCCAGACACTCTTATTGTCACGTATGAAGGGCTCCACCTGCACTTTGCTTACCCATATTTGCTCATGAACCAACCGCAGCAAGCCAACCCGCCGTTCAAAAAGTCAAAGTCTACCTTTTCTCAAGCCCAAGCTCAAGCCCAACACCATGAGGCCCAAGAATCTCAAGAATTTTATGAAAGCCAGGCCACACAAGAAGCCCAGGAAACCCAAGCTGATGTTACTTTCGCCTCCAATTTCCAGGACTCTTCACAAGACATAACCCAAGAAAACATTGGCCCACAAGGATTGCTGGAAGACATGGTGCCTTTAATAATTCGGAACCCTAGCACAAACAACAATTGTGCTAACTCAAATTTGTCTAGTTCTTCGCACCAGTCTCCTCCAACATCACCCCATTCTCTGTCTTGGTCATCTAATTACTCCACCTTATCTTATACCATCGGCTTAAATTCTATCATTTAG 939 0.4334 MMEEPVMAAWSEGSEDELVRELLDDGSPLVNVLPEEAIQNHTRTSSEHANINRFISNIYSGPTIADIESALVVTNQREHFQELSSARVSILERGLNLSKIENKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSHEDPDTLIVTYEGLHLHFAYPYLLMNQPQQANPPFKKSKSTFSQAQAQAQHHEAQESQEFYESQATQEAQETQADVTFASNFQDSSQDITQENIGPQGLLEDMVPLIIRNPSTNNNCANSNLSSSSHQSPPTSPHSLSWSSNYSTLSYTIGLNSII 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1769 312 MobiDBLite consensus disorder prediction 267 296 - -
Glsi06g1769 312 ProSiteProfiles WRKY domain profile. 111 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g1769 312 SUPERFAMILY WRKY DNA-binding domain 114 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi06g1769 312 SMART WRKY_cls 116 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g1769 312 MobiDBLite consensus disorder prediction 186 229 - -
Glsi06g1769 312 Pfam WRKY DNA -binding domain 117 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g1769 312 Gene3D WRKY domain 112 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi06g1769 312 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 86 211 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1769 Glsi-ChrGlsi06 64612991 64615819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1769 15 271 WRKY Transcription Factor Family AT5G43290 41.544 8.00e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi06g1769 WRKY 7.6e-26 CL0274