Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1764 ATGGTGTTGGAGAAGAATTTGAACTATAGTTTTAATGGTTATCAAGTGCCTGTCATTCCTAGAGCTTCGAGATCATCTAGGGGGAAAGGTACTGTCAGGAAGAAGAGAGGGAGCAATCAGATACAGGCTTTTGAAATTTTGGCTAGTGTAGCTGGCAACTTTCTGCAGGAGAATGAAAATTTAAATACTGATAATGCTGTTTGTGGGAAAGATCTTCTTCAATTTGGTGGAAGTAACGTAAAAGATAAACAAGAGGAAGAAGCAAGGTCCTTTAAGGTGGGTCTCTTTGAGCATGGAAGTTGCAGTGAGAATGACTCTGGATGTGTCCCTGGTTTGCAAGCGAAGCATAATGATCAAAGAGTTATGTGCTATTCAGCTTTTCCTGGCAATCATCTTGAAGGCCAAGGACAAAATGTCCTTGAGAGGGAAGGAGGCTTTTCTGGTGTGGTAGAACCAGACAACAGAGCTTCTAAATTGGAAAGTTCGGAAAACTATGTAGAGAAGCCTGCATTGGAGGGCTTCATGCATCTTGGCTCATTTCCCAATGGTTCCACTCGTAGGAAATTATATAATAGAGATGATGACGATAACTTTGTTAGGTGCCCTCAACTAAGCTCCAAGAATAAGATCTCTGGCCCACTGCCAGATATTCCGAGTCAAAGTGTAAAAAGTGTTTCTGGATCCAAAAGTTGTGTAGGCCAAACATTGAAGGATGGGAGTTCTTTTGGAAGTGACGACACCAGTTGTAGGGATAATTATGTGCTTGAAAGCTCACAGAGGATGTATCCATTTAAGAAGAGGAAGTTCTTCAACCAGACCTCATCATCTGCATCTGATAGGTGGTCTCACTGTCAAGGCATATTTGATTCTTCTGACACCAGAGTTAATGCAATTGAAGCATCATCCTCTATAGCTGGTCAACAAGTACATCCTGGGTCCTGGGATTGTAATGGGAGGAAAACTGTGAAGTTTAGCATCAAATCCTTTAAAGTCCCAGAGCTTTTTATTGATATCCCTGAAACTGCAACTATTGGTTCACTGAAGAGGACAGTTATGGAGGCAGTGACAACTATTCTTGGAGATGAACTACACGTGGGTATCCTTCTTCAGGGAAAGAAGGTCAGAGATGACAGTAAAACTCTGATCCAGACTGGGATTTCTCAAGATGACAAACATCATAGGTTGGGGTTCATGTTGGAGCCAGGACACAGTCAAATTTCTCCACCTTCATACAATGAAGACCCTTGTTTGCTAACCACTGGTTTGCAACAAGATATATCCAGGAAATCTACATCTTTGATGCTACAACAAAAAACTTATAATGTTTCCCAAGAGCATTCTCTGATTAAAATTGAAAGTTGTGGTGAAGGTGACCTTAATGTGGTCTCCTCTCTAGCAGATACTTCACGTAACAATACCATGTCAAAGTGCCGTGCTCTGGTTGCCGTTCCTGCCATTAACATGGAGGCATTAGCTGTAATTCCTTTACGTCGTAAATCTGGAAATTCTGACTTTGCACAGCGTCGAATTAGGAGGCCTTTCTCTGTATCTGAAGTAGAAGCATTGGTTGAGGCAGTTGAAAAACTTGGAACCGGAAGATGGCGTGATGTCAAACAGTGTGCTTTTGACAATGCAAAGCATAGGACTTACGTGGATTTGAAGGATAAGTGGAAGACATTAGTGCACACTGCAAGAATCTCCCCTCAGCAAAGGAGAGGGGAACCTGTTCCTCAGGAGCTTTTGGATAGGGTGTTAGCTGCTCATGCCTATTGGTCTCAACAGCAATGTAAGCATCAAGTTAAACCACTTTGA 1812 0.4216 MVLEKNLNYSFNGYQVPVIPRASRSSRGKGTVRKKRGSNQIQAFEILASVAGNFLQENENLNTDNAVCGKDLLQFGGSNVKDKQEEEARSFKVGLFEHGSCSENDSGCVPGLQAKHNDQRVMCYSAFPGNHLEGQGQNVLEREGGFSGVVEPDNRASKLESSENYVEKPALEGFMHLGSFPNGSTRRKLYNRDDDDNFVRCPQLSSKNKISGPLPDIPSQSVKSVSGSKSCVGQTLKDGSSFGSDDTSCRDNYVLESSQRMYPFKKRKFFNQTSSSASDRWSHCQGIFDSSDTRVNAIEASSSIAGQQVHPGSWDCNGRKTVKFSIKSFKVPELFIDIPETATIGSLKRTVMEAVTTILGDELHVGILLQGKKVRDDSKTLIQTGISQDDKHHRLGFMLEPGHSQISPPSYNEDPCLLTTGLQQDISRKSTSLMLQQKTYNVSQEHSLIKIESCGEGDLNVVSSLADTSRNNTMSKCRALVAVPAINMEALAVIPLRRKSGNSDFAQRRIRRPFSVSEVEALVEAVEKLGTGRWRDVKQCAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQQQCKHQVKPL 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1764 603 Pfam Myb-like DNA-binding domain 511 560 IPR001005 -
Glsi06g1764 603 SUPERFAMILY Homeodomain-like 512 593 IPR009057 -
Glsi06g1764 603 SUPERFAMILY Ubiquitin-like 318 409 IPR029071 -
Glsi06g1764 603 CDD SANT_TRF 512 562 - -
Glsi06g1764 603 Gene3D - 500 602 - -
Glsi06g1764 603 SMART sant 510 563 IPR001005 -
Glsi06g1764 603 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 506 565 IPR017930 -
Glsi06g1764 603 ProSiteProfiles Myb-like domain profile. 506 561 IPR001005 -
Glsi06g1764 603 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 117 IPR031105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1764 Glsi-ChrGlsi06 64556491 64560245 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi06g1764 Myb_DNA-binding 2.1e-05 CL0123