Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1742 ATGGGTAACGGTTTCGGAAAAGTCTGCCTTTGCGGCTCCGGTGTCGGCGATATCTCCCGCCGGTACGACAAGTTTACCTTCCCCGGCTCCAGCCAATACGATAAAGCTCTTGGTAATTCTATTTGCTATGTCAGACCCGATCCATATCGATTTTCGTCCTGCTCTAACGTTTTCTCCGATGATGATAGCACCCAGATGACTTTCCGATCAATCTCCAGCGCCTCCGTGAGCGCCAACTCCTCCACCCCACCTTCCATTTCTGTCACTGATTCTTTTCTACAAGGATCTACTGTGGACTCTGCTGCGTCGTTTGAGAGCTCCACTTCCTTCACCTCCGTGCCTCTTCATCCTGCTTCTCGTGGCTTTTCTGTGGGAAGCTCTGGGACTGTCTCCGGTGAACCCATGGATAGATGGTTCTCGTCGGGTCCTATCGTGGATGACGGGTTTGGGTCAAGCCCTTTTGATCATAGATCGAATTGGAAAGGTTCTGGTTCTGTTAAGTTGCAGAGGAGTTCATCACATAACGAATATGAGTTTTCAATCGAACCCCAAAAACCCAGTTTGAAGAAGATTTTCCGAAGAGCTATTTCCAACACAATATCTCGTGGGCAGAGGTCAATTGTTACTCCAATCAAAGGGGTAGTTTCGATCAGAGGATCCATTTCAGATAAGAAGAATGAAAATGCTAATGACACAGTTGATAGTGGTACTTCTTATATTGAGGATGATAATTGTCATTACGACGGAGGTGGTGGTGATGATGATCCTTTAATGGCAAGCAAGAATCTTCACTGGGCTCAAGGGAAAGCTGGTGAAGATCGAATCCATATGGTGATTTCTGAGGATCATGGATGGGTTTTCGTGGGAATCTATGATGGATTCAATGGTCCAGATGCAACTGATTGTCTTCTTAACAATCTCTTCTCAGCTGTTCATAATGAGCTAAAGGGGTTTCTCTGTAATAATGGCAAGTCACTGTCCAAGAATATCTCTGGTATGGCCAATTCCAACACTATGGAGTGTTCAGTTAAGGGAAACGATGAATCCCAAACAAGAAATGGAAAGTTAGATTTGGGTTCTGTTTCAGAATCCAAAAACGCAGAAGCTTCTTTTAGCCATTCAGATGTTCTAGAAGCTCTTTCCGAGGCATTGAGGAAGACAGAGGATGGATTTCTGAAGGATGCTGATGAAATAATAACGAAGAATCCTGTGTTAGCTATGATGGGTTCTTGTGTTTTGGTGATGTTGATGAAAGGAGATGATGTTTACTTGATGAACGTGGGGGATAGTCGAGCTGTTTTAGCTCAGGGTTCAGAATATGATAATGGGTTCTGGAAGAACTACAAGGAACTGAATGTTGATAAGCTTGATGGGTTTAGCCATTTGAATTCCCTTCAGCTCACCATGGATCATAGCACTCACGAGAAAGAGGAGATTCAAAGAATTAGGAGTGAACACCCAGATGATCCTTCTGCAGTAATTAAAGGCCGTGTAAAAGGTCACCTGAATGTCACAAGGGCTTTTGGGGCTGGATTCCTCAAGCAGCCTAAACATAACAGTGCAGTACTGGAGACTTTCAGAGTGAACTACATAGGGGACTCACCCTACATCACTTGTTCTCCTTCACTCCACCACCACAGGCTAAGCCCAAGTGACAGATTCTTGATATTGTCTTCTGATGGACTTTACCAATACTTCACCAATGAAGAAGCAGTTTCCAAAGTAGAGTCATTCATCACTTTGTTTCCAGACAGAGATCCTGCCCAACTTCTCATTGAAGAATCATTGAACCGAGCAGCTAAAAATGCCGGCATGGAGTTCCATGAGTTGCTTGATATCCCACAAGGGGAACGTCGTCTATTCCATGATGACATTTCCGTTGTCATCATCTCCTTGGAGGGAAAAATATGGCGTTCGTCAGTGTAA 1926 0.4434 MGNGFGKVCLCGSGVGDISRRYDKFTFPGSSQYDKALGNSICYVRPDPYRFSSCSNVFSDDDSTQMTFRSISSASVSANSSTPPSISVTDSFLQGSTVDSAASFESSTSFTSVPLHPASRGFSVGSSGTVSGEPMDRWFSSGPIVDDGFGSSPFDHRSNWKGSGSVKLQRSSSHNEYEFSIEPQKPSLKKIFRRAISNTISRGQRSIVTPIKGVVSIRGSISDKKNENANDTVDSGTSYIEDDNCHYDGGGGDDDPLMASKNLHWAQGKAGEDRIHMVISEDHGWVFVGIYDGFNGPDATDCLLNNLFSAVHNELKGFLCNNGKSLSKNISGMANSNTMECSVKGNDESQTRNGKLDLGSVSESKNAEASFSHSDVLEALSEALRKTEDGFLKDADEIITKNPVLAMMGSCVLVMLMKGDDVYLMNVGDSRAVLAQGSEYDNGFWKNYKELNVDKLDGFSHLNSLQLTMDHSTHEKEEIQRIRSEHPDDPSAVIKGRVKGHLNVTRAFGAGFLKQPKHNSAVLETFRVNYIGDSPYITCSPSLHHHRLSPSDRFLILSSDGLYQYFTNEEAVSKVESFITLFPDRDPAQLLIEESLNRAAKNAGMEFHELLDIPQGERRLFHDDISVVIISLEGKIWRSSV 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1742 641 Pfam Protein phosphatase 2C 382 602 IPR001932 -
Glsi06g1742 641 Gene3D - 234 638 IPR036457 -
Glsi06g1742 641 ProSiteProfiles PPM-type phosphatase domain profile. 255 632 IPR001932 -
Glsi06g1742 641 CDD PP2Cc 269 632 IPR001932 -
Glsi06g1742 641 SUPERFAMILY PP2C-like 269 633 IPR036457 -
Glsi06g1742 641 PANTHER PROTEIN PHOSPHATASE 2C 224 630 IPR015655 GO:0004722|GO:0006470
Glsi06g1742 641 SMART PP2C_4 256 630 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1742 Glsi-ChrGlsi06 64355334 64358509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1742 1 641 PP2C-type Phosphatase Gene Family AT2G28890 51.479 0.0 598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g1742 06 64355334 64358509 Glsi06g1742 06 64355334 64358509 ECH