Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1741 ATGATGAATCCTCGGCTTCGCACTCTACTATGGTGGAGAAACTGGGCCAACAGGGACTGTGCACTCGCCGCCGTTGGCTTCACCATCATCGTCTTTGCACTTGCTCTCCTCTCCAACTCTCGCCGCCCCGCCGTCGACGATCCTAAACTCAACCAACCATTCAATCTAAACCCTACTACCCAACTCGTCAAGTTGATCCTTCTGCGCAATGCAAAGGATAGAGGCGCCCTGTGTTTGGACGGAAGCTTGCCAGGGTATCATTTTCAAAAGGGGTTTGGATCTGGTTCTGAGAATTGGCTGCTTCACATTGAGGGAGGAGGTTGGTGTGATTCCATATCGTCGTGTTCTCAGCGTAAATATACTAGATTAGGATCTACAAACTATATGGAAAACGAAATTCCGTTTCCAGGAATTTTAAGCTCTGACCCCTTGCAAAATCCGGGCTTTTTTAATTGGAACAAGGTGAACATACGTTATTGTGATGGTGCTTCTTTTGCTGGCCACCAAGAAAATGAGATTAAGAAAGGAAGTAGATTATTCTTCAGAGGCCAGCTCATATGGGAAACACTTATGGATGAACTTTTATCAATTGGCATGTCTAGAGCAAAACAGGCCCTGCTTTCTGGATGCTCTGCTGGAGCGCTGGCAACTCTTATACATTGTGATGACTTTCGAGAACTTCTCCCAAAGGATGCACATGTCAAGTGTCTTTCTGATGCAGGTTTTTTCCTTGATGAAAAGGACATTCTTGGCAATAGAACCATGAGATCTTTCTATCATGATGTTGTCCAGCTTCAGTGTTTCTTTCCTGAAGAAATTATTAAAAACATAAAGACTCCAGTTTTCTTGGTCAACCCTGCTTATGATTTCTGGCAGATACAACATGTGTTGGTAGCAGATGGATCAGATCCTCATGACCATTGGAAAAGCTGCAGACTGAGCATTAGAAATTGTAATAATGACCAGCTTGCTGTACTTCAAGGTTTCCGGAGTTCTTTGCTTAAGGCAGTAAATGGTTCTCAGCAACAAAAGGAAGTAGGAATGTTTATAAACTCCTGCTTTATTCATTGCCAGACTCTATATGCAAATATATGGCATTCAGCAAATTCTCCCAAAATAAACAATAAGACAATAGCTGAATCTGTTGGTGAGTGGTACTTCAACCGATCTGAGTCTGTGAAGCAAATTGACTGCCCCTATCCATGCAACCCTACCTGTTATAATAAGGATTTCACCCAAACATGA 1245 0.4289 MMNPRLRTLLWWRNWANRDCALAAVGFTIIVFALALLSNSRRPAVDDPKLNQPFNLNPTTQLVKLILLRNAKDRGALCLDGSLPGYHFQKGFGSGSENWLLHIEGGGWCDSISSCSQRKYTRLGSTNYMENEIPFPGILSSDPLQNPGFFNWNKVNIRYCDGASFAGHQENEIKKGSRLFFRGQLIWETLMDELLSIGMSRAKQALLSGCSAGALATLIHCDDFRELLPKDAHVKCLSDAGFFLDEKDILGNRTMRSFYHDVVQLQCFFPEEIIKNIKTPVFLVNPAYDFWQIQHVLVADGSDPHDHWKSCRLSIRNCNNDQLAVLQGFRSSLLKAVNGSQQQKEVGMFINSCFIHCQTLYANIWHSANSPKINNKTIAESVGEWYFNRSESVKQIDCPYPCNPTCYNKDFTQT 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1741 414 Pfam Pectinacetylesterase 58 266 IPR004963 GO:0016787
Glsi06g1741 414 PANTHER NOTUM-RELATED 37 408 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1741 Glsi-ChrGlsi06 64334731 64339267 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1741 1 377 Carbohydrate Esterase AT3G09410 57.215 1.68e-168 476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g1741 06 64334731 64339267 Glsi06g1741 06 64334731 64339267 ECH