Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1740 ATGGCTAATCCTCGACTTCGTACTCTACTGTGGTGGAGAAAGTGGGCCAAGAAGGACTGGGCAATCGCCGCTGTAGGCTTCACCGTCATCGTCTTCGCACTTAGTCTCATCTTCGGCTCCCAGCGAACCATCGATGGTCCCAAAATAAAAATCAACCCCTCATTGGGTCTGAGCTCTGCCAACGATCTCGTGGATTTGACCCTGCTGCGAAATGCCAACGATAGAGGGGCTTTTTGTTTGGATGGAAGCTTGCCAGGGTACCATTTCCAAAAGGGGTTTGGATCGGGCTCTAACAATTGGCTACTTCACATTGAGGGAGGAGGTTGGTGTAATACGATTTCATCGTGTTCTCAGCGTAAGATGACTGCTTTAGGATCCTCAGAGCATATGGAAAGACAAGTTCAATTTTCAGGAATATTAAGCTCTGACCCTGCTCAGAATCCTGATTTCTTTAACTGGAACAAGGTCAAGATACGTTATTGTGATGGTGCATCTTTGGCTGGCCACCCAGAACGTGAGGTTAAGAAAGGAAGTAAATTATTCTTTAGAGGCCAGCTCATATGGGAAGCACTTATGGATGAACTCTTGTCAATTGGCTTGTCTAAAGCAAAACAGGCTCTACTGTCAGGATGCTCTGCTGGAGGTTTGGCAACTCTTCTACATTGTGATGACTTTCGAGAAATTCTTCCAAAGGAGGCAACTGTCAAGTGTCTTGCTGATGCAGGGTTTTTCCTAGACGAGAAGGATATTTTTGGCAATAGAACCATGAGATCTTTTTATCATGATGTTGTCCAGCTTCAGGGTGTTATGAAAAGTTTGCACAAAGATTGCATTACTGGAATGGAACCATCTAGGTGTCTCTTTCCAGTAGAAATTATTAAAAAGTTAAAGACGCCTGTGTTCCTTGTCCACCCAGCTTATGATTTCTGGCAGATACAACATATCTTGGTACCAGATGGATCAGATCCTCATGGCCACTGGAAAAGTTGCAGATTAAGCATTCACAACTGTCATGCTGGTCTGATGGATATACTTCAAGGTTTCCGGCGATCTTTGCTTAAATTCGTTAATGAATTCCGGCAACGAAAGGAAGTGGGACTGTTTGTAAATTCCTGCTTTATTCATTGCCAGACTTTAATGGCAGAGACATGGCATTCAGCCAATTCTCCTAAAATAAACAAAAAGACAATAGCTGAATCTGTTGCTGACTGGTTCTTCGACCGAAAAGTGGTGAAGCAAATTGACTGTCCTTATCCATGCAACCCCACTTGCCATAATATGGATTTCACCAGATTATAA 1299 0.4349 MANPRLRTLLWWRKWAKKDWAIAAVGFTVIVFALSLIFGSQRTIDGPKIKINPSLGLSSANDLVDLTLLRNANDRGAFCLDGSLPGYHFQKGFGSGSNNWLLHIEGGGWCNTISSCSQRKMTALGSSEHMERQVQFSGILSSDPAQNPDFFNWNKVKIRYCDGASLAGHPEREVKKGSKLFFRGQLIWEALMDELLSIGLSKAKQALLSGCSAGGLATLLHCDDFREILPKEATVKCLADAGFFLDEKDIFGNRTMRSFYHDVVQLQGVMKSLHKDCITGMEPSRCLFPVEIIKKLKTPVFLVHPAYDFWQIQHILVPDGSDPHGHWKSCRLSIHNCHAGLMDILQGFRRSLLKFVNEFRQRKEVGLFVNSCFIHCQTLMAETWHSANSPKINKKTIAESVADWFFDRKVVKQIDCPYPCNPTCHNMDFTRL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1740 432 Pfam Pectinacetylesterase 58 410 IPR004963 GO:0016787
Glsi06g1740 432 PANTHER NOTUM-RELATED 38 427 IPR004963 GO:0016787
Glsi06g1740 432 SUPERFAMILY alpha/beta-Hydrolases 188 320 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1740 Glsi-ChrGlsi06 64327121 64332103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1740 1 396 Carbohydrate Esterase AT3G09410 59.000 0.0 512