Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1723 ATGCATTCAATTGATGATACTGGCGATGAAATTGGTTCTGTTAATATCATGAATTCTGCTCATACTCCTGCTTCTGTTGCTGCACATTCTAATTCTGTAGGGGACATTAAGGCCAATAACATTCTCATAGGCCCTGAATTTGAACCATACATAGCTGATTTTGGGCTTGCTAAACTTGTTGATGATGGAGATTTTGCAAGATCCTCCAGCACACTTGCTGGTTCCTATGGCTACATTGCGCCTGAATATGGATACATGATGAAGATAACAGAGAAAAGTGATGTGTACAGTTATGGCATTGTTGTGTTAGAAGTGCTAACAGGGAAGCAACCAATTGATCCAACAATACCAGATGGACTCCATATTGTTGACTGGGTAAGACAGAAAAGAGGGAGAAATATTGAAGTACTAGATGAAAGCTTACGTGCTAGGCCAGAACCTGAGATTGAGGAAATATTGCAGACTTTAGGGGTATCTTTGCTCTGTGTAAACCCTGGCCCAGATGATAGGCCAACCATGAAAGATGTAGCAGCAATGCTGAAAGAAATTAGGCAGGAGAGGGAGGAATATATGAAAGTTAACATGCTTCTTGATGGATCTTCTGCAAATGATCAACAAGAAGAAGATAGTAATCATTCCAGTGAAGAGCCAAGAGGGAAAATGAGACACCCATCATACCCAATAAGCAGCAACACAAATTTCTCTGCCTCTTTCTTGGTCTCCCCTTCATCATCCAATTCTAAAGTAACATTCAAATAG 759 0.4045 MHSIDDTGDEIGSVNIMNSAHTPASVAAHSNSVGDIKANNILIGPEFEPYIADFGLAKLVDDGDFARSSSTLAGSYGYIAPEYGYMMKITEKSDVYSYGIVVLEVLTGKQPIDPTIPDGLHIVDWVRQKRGRNIEVLDESLRARPEPEIEEILQTLGVSLLCVNPGPDDRPTMKDVAAMLKEIRQEREEYMKVNMLLDGSSANDQQEEDSNHSSEEPRGKMRHPSYPISSNTNFSASFLVSPSSSNSKVTFK 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1723 252 Pfam Protein kinase domain 35 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1723 252 Gene3D Transferase(Phosphotransferase) domain 1 16 208 - -
Glsi06g1723 252 ProSiteProfiles Protein kinase domain profile. 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1723 252 MobiDBLite consensus disorder prediction 225 252 - -
Glsi06g1723 252 MobiDBLite consensus disorder prediction 208 222 - -
Glsi06g1723 252 Coils Coil 173 193 - -
Glsi06g1723 252 SMART serkin_6 5 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1723 252 MobiDBLite consensus disorder prediction 200 252 - -
Glsi06g1723 252 SUPERFAMILY Protein kinase-like (PK-like) 34 205 IPR011009 -
Glsi06g1723 252 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1723 Glsi-ChrGlsi06 64015364 64024258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1723 34 237 Receptor kinase-like Gene Family AT5G56040 49.309 9.06e-54 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi06g1723 Pkinase 1.3e-17 CL0016