Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1721 ATGGCATCCACCACCCCCCATTTTATCATTTTTGTGCACATTCTCATTATTCTTCTTGCTAAAAGCAATGCCTTGACACCCAACTTCTCATCCATTCTAGTCTTTGGGGATTCAACGGTGGACGCAGGGAATAACAACTTCATCACAACGTGGTTGAAGGCAAATCATTTCCCTTATGGCATGGAATTCCCTGGTCATGTGCCCACTGGGAGATTTTCCGATGGAAAATTGGTTCCTGACTTCATTGCCTCTGTGCTAGGCATCAAAGAGACCATCCCTCCATTCCTGGACCCAAGCCTATCAGATCATGAACTTCTAACTGGCGTCTGCTTTGCTTCAGCTGGATCAGGATTTGATGATTTGACCACAGCTGCTTCTGGAGTCATCCCTGTTTCCAAGCAAATTGATTACTTCAAAGCTTATATAGAAAAAATCAAGCGCATTGTGGGGGAAGAAGAAGCTCAAAAGATACTGGCAGGTGCTGCAGTTATTATCAGTGCTGGAACTAATGACTTCGTTTTCAATTTTTATGACATTCCCACAAGAAGGTCTGAATTCAGCATCAGTGGGTACCAGGATTTTCTGCTGAAAAGGCTGCAAGAGTTCATTAAGGAAATATACTACCTCGGATGCAGGAAGATGGCTGTGGTTGGGCTTCCTCCGATCGGATGTGTCCCCCTTCAGATGACAGCAAAATTTGAGAATCCAGAGGATCGGAAATGCGTGGAGGATGAGAGTTTAGATTCTCAACTCTACAATAAAAAATTGGCAAGGCTATTGCCTCAAGCACAGGCAATGCTTCCAGGAAGCAGAATTGTTTACGCAGACATATATAGCCCATTAAACAACCTCATCAATCAACCTGAAAAATACGGGTTTGAGGTGACGAATAAAGGGTGTTGTGGGAGTGGGTTTGTCGAAACAGGCCCTTTGTGTAACAGATTCACACCAACATGTGATGATGCTTCAAAATATGTATTTTGGGATAGTGTCCATCCAACTGAAGCAACCTACCATTATATGGCCAAGTACATGGAGGAGGAAGTGCTGCCCAAGTTCCTGAATAGTAGCAGTGAGGTGCCTTCACACACTATTCCTCATCCTTCAGATAATCGAGTTAATATTAGAGTCCAGACAACAGTTGGGTTCCCTTCCTCGCTTAGACTCACCCTCACTGCCAAAAGAAGCGCCACAACCACAACCATAACCGCCTCCCCTGCTGTCAAGTACTCCAAGCTTAAAAGGCTCTTCTCTGGAAAGAACTTAGGATTCACCACAACTGTTACTGCTTCTACCTGTGGAAGCAGGATTCAAGTGACAGTAAATGGAGCAGATGGGCTCAAGAGTAATAGGCGTAGGAATGAGAATTGTGCTTCTGTAAGCATTGATAATATGGATCCTCCTTTGCTGATCAGGCGGGTTCACAAGTCCGAGGATGGAAACCAGAACCAGGTGGATAGTCTTTGGAAAAGGAGGTTTGGTCGGGCCGCATTGAAAAGTTTGCAACTTCAACACATTCATCATCCAAGGCATCATCTTCAGCCTACAAGTGTTTAA 1557 0.4451 MASTTPHFIIFVHILIILLAKSNALTPNFSSILVFGDSTVDAGNNNFITTWLKANHFPYGMEFPGHVPTGRFSDGKLVPDFIASVLGIKETIPPFLDPSLSDHELLTGVCFASAGSGFDDLTTAASGVIPVSKQIDYFKAYIEKIKRIVGEEEAQKILAGAAVIISAGTNDFVFNFYDIPTRRSEFSISGYQDFLLKRLQEFIKEIYYLGCRKMAVVGLPPIGCVPLQMTAKFENPEDRKCVEDESLDSQLYNKKLARLLPQAQAMLPGSRIVYADIYSPLNNLINQPEKYGFEVTNKGCCGSGFVETGPLCNRFTPTCDDASKYVFWDSVHPTEATYHYMAKYMEEEVLPKFLNSSSEVPSHTIPHPSDNRVNIRVQTTVGFPSSLRLTLTAKRSATTTTITASPAVKYSKLKRLFSGKNLGFTTTVTASTCGSRIQVTVNGADGLKSNRRRNENCASVSIDNMDPPLLIRRVHKSEDGNQNQVDSLWKRRFGRAALKSLQLQHIHHPRHHLQPTSV 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1721 518 Pfam GDSL-like Lipase/Acylhydrolase 32 344 IPR001087 GO:0016788
Glsi06g1721 518 FunFam GDSL esterase/lipase APG 21 349 - -
Glsi06g1721 518 CDD SGNH_plant_lipase_like 31 345 IPR035669 -
Glsi06g1721 518 SUPERFAMILY SGNH hydrolase 160 347 - -
Glsi06g1721 518 Gene3D SGNH hydrolase 20 350 IPR036514 -
Glsi06g1721 518 PANTHER GDSL ESTERASE/LIPASE EXL3 17 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1721 Glsi-ChrGlsi06 64004719 64009887 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1721 22 349 Pollen Coat Proteome AT1G75910 34.441 4.80e-60 199